hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04553856/chunk_1/iprscan-20090618-04553856.nocrc
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Query sequence: ef06191
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00169.19.fs PH domain                                      135.5    8.8e-41   2
PF00169.19.ls PH domain                                      139.5    8.2e-39   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00169.19.fs   1/2     155   250 ..     1    92 []    63.1  9.9e-19
PF00169.19.ls   1/2     155   250 ..     1    92 []    65.1  2.1e-16
PF00169.19.fs   2/2     349   442 ..     1    92 []    72.4  1.4e-21
PF00169.19.ls   2/2     349   442 ..     1    92 []    74.5  3.2e-19

Alignments of top-scoring domains:
PF00169.19.fs: domain 1 of 2, from 155 to 250: score 63.1, E = 9.9e-19
                   *->vikeGwLlkkggkkswkkRyfvLfddvLlyykdkk.kkpkgsipLsg
                       +++ +Ll+k+++++w k  +v++d++Ll+yk++k+  p++ +pL+g
     ef06191   155    AKICAFLLRKKRFGQWTKLLCVIKDTKLLCYKSSKdQQPQMELPLQG 201  

                   iqvtkvpdn..krkncFeirt.dretlllqaeseeerkeWvkaiqsair<
                   +++t++p+ ++k+k+ ++i+ ++ + l+l+  s+e++++W+k i++a + 
     ef06191   202 CNITYIPKDskKKKHELKITQqGTDPLVLAVQSKEQAEQWLKVIKEAYS  250  

                   -*
                     
     ef06191     -    -    

PF00169.19.ls: domain 1 of 2, from 155 to 250: score 65.1, E = 2.1e-16
                   *->vikeGwLlkkggkkswkkRyfvLfddvLlyykdkk.kkpkgsipLsg
                       +++ +Ll+k+++++w k  +v++d++Ll+yk++k+  p++ +pL+g
     ef06191   155    AKICAFLLRKKRFGQWTKLLCVIKDTKLLCYKSSKdQQPQMELPLQG 201  

                   iqvtkvpdn..krkncFeirt.dretlllqaeseeerkeWvkaiqsair<
                   +++t++p+ ++k+k+ ++i+ ++ + l+l+  s+e++++W+k i++a + 
     ef06191   202 CNITYIPKDskKKKHELKITQqGTDPLVLAVQSKEQAEQWLKVIKEAYS  250  

                   -*
                     
     ef06191     -    -    

PF00169.19.fs: domain 2 of 2, from 349 to 442: score 72.4, E = 1.4e-21
                   *->vikeGwLlkkggkkswkkRyfvLfddvLlyykdkk..kkpkgsipLs
                      v  +G+L + + +++w++R++ ++d++L+++kd+++ k++  sipL+
     ef06191   349    VPTCGYLNVLS-NSRWRERWCRVKDNKLIFHKDRTdlKTHIVSIPLR 394  

                   giqvtkvpdnkrkncFeirt.dretlllqaeseeerkeWvkaiqsair<-
                   g++v +  d+k++ +F++  +++e+ +l+a+s+e++ +W+  +       
     ef06191   395 GCEVIPGLDSKHPLTFRLLRnGQEVAVLEASSSEDMGRWIGILLAETG   442  

                   *
                    
     ef06191     -   -    

PF00169.19.ls: domain 2 of 2, from 349 to 442: score 74.5, E = 3.2e-19
                   *->vikeGwLlkkggkkswkkRyfvLfddvLlyykdkk..kkpkgsipLs
                      v  +G+L + + +++w++R++ ++d++L+++kd+++ k++  sipL+
     ef06191   349    VPTCGYLNVLS-NSRWRERWCRVKDNKLIFHKDRTdlKTHIVSIPLR 394  

                   giqvtkvpdnkrkncFeirt.dretlllqaeseeerkeWvkaiqsair<-
                   g++v +  d+k++ +F++  +++e+ +l+a+s+e++ +W+  +       
     ef06191   395 GCEVIPGLDSKHPLTFRLLRnGQEVAVLEASSSEDMGRWIGILLAETG   442  

                   *
                    
     ef06191     -   -    

//