hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-04553856/chunk_1/iprscan-20090618-04553856.nocrc
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Query sequence: ef06191
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00233                                                 118.0      1e-30   2

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00233     1/2     155   252 ..     1    82 []    56.1  4.6e-12
SM00233     2/2     349   444 ..     1    82 []    62.0  7.8e-14

Alignments of top-scoring domains:
SM00233: domain 1 of 2, from 155 to 252: score 56.1, E = 4.6e-12
                   *->vikeGwLlkks.k.swkkryfvLfngvLlyyksk...kpkgsipLsg
                        ++ +Ll+k+++++w+k  +v+++  Ll+yks++++ p++++pL+g
     ef06191   155    AKICAFLLRKKrFgQWTKLLCVIKDTKLLCYKSSkdqQPQMELPLQG 201  

                   csvre.p........cFeivt.dr.tlllqAeseeereeWvealqsaiak
                   c ++  p++++++++ ++i+ ++ + l+l+  s+e++e+W++ +++a + 
     ef06191   202 CNITYiPkdskkkkhELKITQqGTdPLVLAVQSKEQAEQWLKVIKEAYSG 251  

                   a<-*
                   +   
     ef06191   252 C    252  

SM00233: domain 2 of 2, from 349 to 444: score 62.0, E = 7.8e-14
                   *->vikeGwLlkksk.swkkryfvLfngvLlyyksk....kpkgsipLsg
                      v  +G+L ++s+++w++r+++++++ L+++k++++ ++++ sipL+g
     ef06191   349    VPTCGYLNVLSNsRWRERWCRVKDNKLIFHKDRtdlkTHIVSIPLRG 395  

                   csvre.p......cFeivt.dr.tlllqAeseeereeWvealqsaiaka<
                   c+v ++ +++++ +F++  +++++ +l A+s+e++ +W+  l + + ++ 
     ef06191   396 CEVIPgLdskhplTFRLLRnGQeVAVLEASSSEDMGRWIGILLAETGSS  444  

                   -*
                     
     ef06191     -    -    

//