hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-12312101/chunk_1/iprscan-20080808-12312101.nocrc
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Query sequence: ef06292
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model           Description                             Score    E-value  N 
--------        -----------                             -----    ------- ---
PF01553.11.ls   Acyltransferase                         145.6    1.2e-40   1
PF01553.11.fs   Acyltransferase                         143.7    4.6e-40   1

Parsed for domains:
Model           Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------        ------- ----- -----    ----- -----      -----  -------
PF01553.11.fs     1/1     151   296 ..     1   158 []   143.7  4.6e-40
PF01553.11.ls     1/1     151   296 ..     1   158 []   145.6  1.2e-40

Alignments of top-scoring domains:
PF01553.11.fs: domain 1 of 1, from 151 to 296: score 143.7, E = 4.6e-40
                   *->rvevhglEnlpr...kgpaivvaNHqSylDplvlslllykrhpwlpr
                      +v+ +g  +l+r  +++p+++ + H+Sy+D+l+ls+lly  +   ++
     ef06292   151    CVNEEGIQKLQRaiqEHPVVLLPSHRSYIDFLMLSFLLYNYD---LP 194  

                   rlvfvakkelftvpllgwlmrllgaifidRKkHmrfplekkrkdaraslk
                    +v++a+ + + ++ +g+l+r +ga+f++R    +f   +++k ++a+++
     ef06292   195 VPVIAAGMDFLGMKMVGELLRMSGAFFMRR----TF---GGNKLYWAVFS 237  

                   elvelllraGklpvviFPEGTrlsrgkrgellplpfKkGafrlAlellkh
                   e+v+++lr+G+ pv++F EGTr sr+   ++  l +K G++ +++e++++
     ef06292   238 EYVKTMLRNGYAPVEFFLEGTR-SRS--AKT--LTPKFGLLNIVMEPFFK 282  

                   svgagvpIvPvais<-*
                   ++ +++++vP++is   
     ef06292   283 REVFDTYLVPISIS    296  

PF01553.11.ls: domain 1 of 1, from 151 to 296: score 145.6, E = 1.2e-40
                   *->rvevhglEnlpr...kgpaivvaNHqSylDplvlslllykrhpwlpr
                      +v+ +g  +l+r  +++p+++ + H+Sy+D+l+ls+lly  +   ++
     ef06292   151    CVNEEGIQKLQRaiqEHPVVLLPSHRSYIDFLMLSFLLYNYD---LP 194  

                   rlvfvakkelftvpllgwlmrllgaifidRKkHmrfplekkrkdaraslk
                    +v++a+ + + ++ +g+l+r +ga+f++R    +f   +++k ++a+++
     ef06292   195 VPVIAAGMDFLGMKMVGELLRMSGAFFMRR----TF---GGNKLYWAVFS 237  

                   elvelllraGklpvviFPEGTrlsrgkrgellplpfKkGafrlAlellkh
                   e+v+++lr+G+ pv++F EGTr sr+   ++  l +K G++ +++e++++
     ef06292   238 EYVKTMLRNGYAPVEFFLEGTR-SRS--AKT--LTPKFGLLNIVMEPFFK 282  

                   svgagvpIvPvais<-*
                   ++ +++++vP++is   
     ef06292   283 REVFDTYLVPISIS    296  

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