hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-12572915/chunk_1/iprscan-20080808-12572915.nocrc
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Query sequence: ef06366
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model          Description                              Score    E-value  N 
--------       -----------                              -----    ------- ---
PF01532.11.ls  Glycosyl hydrolase family 47             957.7   4.3e-285   1
PF01532.11.fs  Glycosyl hydrolase family 47             955.7   1.7e-284   1

Parsed for domains:
Model          Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------       ------- ----- -----    ----- -----      -----  -------
PF01532.11.fs    1/1     188   627 ..     1   518 []   955.7 1.7e-284
PF01532.11.ls    1/1     188   627 ..     1   518 []   957.7 4.3e-285

Alignments of top-scoring domains:
PF01532.11.fs: domain 1 of 1, from 188 to 627: score 955.7, E = 1.7e-284
                   *->MFqHAWdgYkkYAwghDELkPiscrgrkrdndPsnlhssdifGesnl
                      M++HAWd+Y+ Y+wgh+EL+Pi ++g          hs +ifG+s++
     ef06366   188    MMKHAWDNYRTYGWGHNELRPIARKG----------HSPNIFGSSQM 224  

                   gaTivDaLDTLyiMGledEfreAvdwveetlsfdnplidstVsVFEtTIR
                   gaTivDaLDTLyiMGl+dEf ++++w+e++l+f+   ++s+VsVFE++IR
     ef06366   225 GATIVDALDTLYIMGLHDEFLDGQRWIEDNLDFS---VNSEVSVFEVNIR 271  

                   vlGGLLSAYaLtgdpkklgdvegsdydkmLLkKAvdlAdrLLpAFnTptG
                   ++GGLL+AY+L+g+             ++++ KAv+lA++LLpAFnTptG
     ef06366   272 FIGGLLAAYYLSGE-------------EIFKIKAVQLAEKLLPAFNTPTG 308  

                   IPysrvNlksgvaknytwasggssilAefGTLlLEFtyLSrLTGdptYek
                   IP+++vNlksgv++n++was+gssilAefGTL++EF++LS+LTGd tY+k
     ef06366   309 IPWAMVNLKSGVGRNWGWASAGSSILAEFGTLHMEFIHLSYLTGDLTYYK 358  

                   karkardaLwklrpscekpeGLypnyinpqtGqqwtqshislGAggDGSf
                   k++++r+ L+k+    ++p+GLypny+np+tG +w+q+h+s+G++gD Sf
     ef06366   359 KVMHIRKLLQKM----DRPNGLYPNYLNPRTG-RWGQYHTSVGGLGD-SF 402  

                   YEYLlKayiltgktdleakdmyneAieAikkhlrrqskpsgLtyfaelkn
                   YEYLlKa+++++ktd+ea++my++AieAi+khl+++s+ +gLt+++e+kn
     ef06366   403 YEYLLKAWLMSDKTDHEARKMYDDAIEAIEKHLIKKSR-GGLTFIGEWKN 451  

                   grfkilepkmdHLaCFdGGlfalgadsldaffpgEvlqvlegdkeiaitc
                   g+   le km+HLaCF+GG+falgad  +a +++   ++le+++eia+tc
     ef06366   452 GH---LEKKMGHLACFAGGMFALGADGSRA-DKA--GHYLELGAEIARTC 495  

                   HemYdrtwtklGpepfrFneaveksdqlslyeaaavkvlellafypLRPE
                   He+Ydrt  klGpe+f F++ave         a av++ e  ++y+LRPE
     ef06366   496 HESYDRTALKLGPESFKFDGAVE---------AVAVRQAE--KYYILRPE 534  

                   viEStyyLYRNIaTkdpkmPTTNEYrewgweavqalekycRvkcGgglss
                   viE+++yL+R  +T+dp       Yr+wgwea+ a+ekycRv++G     
     ef06366   535 VIETYWYLWR--FTHDPR------YRQWGWEAALAIEKYCRVNGG----- 571  

                   RyaglrnVytksigskeDrMESFfLAETlKYLYLlFdddnalqvellpld
                    ++g+++Vy   +  ++D+++SFfLAETlKYLYLlF++d     +llpld
     ef06366   572 -FSGVKDVYSSTP-THDDVQQSFFLAETLKYLYLLFSGD-----DLLPLD 614  

                   kctdevqgnwVFNTEAHPlpi<-*
                   +        wVFNTEAHPlp+   
     ef06366   615 H--------WVFNTEAHPLPV    627  

PF01532.11.ls: domain 1 of 1, from 188 to 627: score 957.7, E = 4.3e-285
                   *->MFqHAWdgYkkYAwghDELkPiscrgrkrdndPsnlhssdifGesnl
                      M++HAWd+Y+ Y+wgh+EL+Pi ++g          hs +ifG+s++
     ef06366   188    MMKHAWDNYRTYGWGHNELRPIARKG----------HSPNIFGSSQM 224  

                   gaTivDaLDTLyiMGledEfreAvdwveetlsfdnplidstVsVFEtTIR
                   gaTivDaLDTLyiMGl+dEf ++++w+e++l+f+   ++s+VsVFE++IR
     ef06366   225 GATIVDALDTLYIMGLHDEFLDGQRWIEDNLDFS---VNSEVSVFEVNIR 271  

                   vlGGLLSAYaLtgdpkklgdvegsdydkmLLkKAvdlAdrLLpAFnTptG
                   ++GGLL+AY+L+g+             ++++ KAv+lA++LLpAFnTptG
     ef06366   272 FIGGLLAAYYLSGE-------------EIFKIKAVQLAEKLLPAFNTPTG 308  

                   IPysrvNlksgvaknytwasggssilAefGTLlLEFtyLSrLTGdptYek
                   IP+++vNlksgv++n++was+gssilAefGTL++EF++LS+LTGd tY+k
     ef06366   309 IPWAMVNLKSGVGRNWGWASAGSSILAEFGTLHMEFIHLSYLTGDLTYYK 358  

                   karkardaLwklrpscekpeGLypnyinpqtGqqwtqshislGAggDGSf
                   k++++r+ L+k+    ++p+GLypny+np+tG +w+q+h+s+G++gD Sf
     ef06366   359 KVMHIRKLLQKM----DRPNGLYPNYLNPRTG-RWGQYHTSVGGLGD-SF 402  

                   YEYLlKayiltgktdleakdmyneAieAikkhlrrqskpsgLtyfaelkn
                   YEYLlKa+++++ktd+ea++my++AieAi+khl+++s+ +gLt+++e+kn
     ef06366   403 YEYLLKAWLMSDKTDHEARKMYDDAIEAIEKHLIKKSR-GGLTFIGEWKN 451  

                   grfkilepkmdHLaCFdGGlfalgadsldaffpgEvlqvlegdkeiaitc
                   g+   le km+HLaCF+GG+falgad  +a +++   ++le+++eia+tc
     ef06366   452 GH---LEKKMGHLACFAGGMFALGADGSRA-DKA--GHYLELGAEIARTC 495  

                   HemYdrtwtklGpepfrFneaveksdqlslyeaaavkvlellafypLRPE
                   He+Ydrt  klGpe+f F++ave         a av++ e  ++y+LRPE
     ef06366   496 HESYDRTALKLGPESFKFDGAVE---------AVAVRQAE--KYYILRPE 534  

                   viEStyyLYRNIaTkdpkmPTTNEYrewgweavqalekycRvkcGgglss
                   viE+++yL+R  +T+dp       Yr+wgwea+ a+ekycRv++G     
     ef06366   535 VIETYWYLWR--FTHDPR------YRQWGWEAALAIEKYCRVNGG----- 571  

                   RyaglrnVytksigskeDrMESFfLAETlKYLYLlFdddnalqvellpld
                    ++g+++Vy   +  ++D+++SFfLAETlKYLYLlF++d     +llpld
     ef06366   572 -FSGVKDVYSSTP-THDDVQQSFFLAETLKYLYLLFSGD-----DLLPLD 614  

                   kctdevqgnwVFNTEAHPlpi<-*
                   +        wVFNTEAHPlp+   
     ef06366   615 H--------WVFNTEAHPLPV    627  

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