hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-13420325/chunk_1/iprscan-20080808-13420325.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: eg00383 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00667 31.3 0.00013 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00667 1/1 10 42 .. 1 33 [] 31.3 0.00013 Alignments of top-scoring domains: SM00667: domain 1 of 1, from 10 to 42: score 31.3, E = 0.00013 *->rrselnrlileYLlenGyketaetlqkEtglsl<-* ++sel+ l+ eYL+ +++t++t+ kE++++ eg00383 10 HESELLGLVKEYLDFAEFEDTLKTFSKECKIKG 42 //