hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-13484487/chunk_1/iprscan-20080808-13484487.nocrc
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Query sequence: eg00407
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00336                                                  67.1    2.2e-15   1
SM00184                                                  37.1    2.4e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      83   123 ..     1    23 []    37.1  2.4e-06
SM00336    1/1     158   199 ..     1    51 []    67.1  2.2e-15

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 83 to 123: score 37.1, E = 2.4e-06
                   *->CpICle....pvvlpCgH.FCr.Ci............CPlC<-*
                      Cp+Cl+   +p++l+CgH++C+ C+ + +++ +++ +CP+C   
     eg00407    83    CPVCLQyfaePMMLDCGHnICCaCLarcwgtaetnvsCPQC    123  

SM00336: domain 1 of 1, from 158 to 199: score 67.1, E = 2.2e-15
                   *->eraplCeeHgdeepaeffCveedgallCrdCdeageHqanklfrgHr
                      +++ +Ce H+  ep++++C eed++++C++Cd+++eH      rgH 
     eg00407   158    GEMGVCEKHR--EPLKLYC-EEDQMPICVVCDRSREH------RGHS 195  

                   vvll<-*
                   v +l   
     eg00407   196 VLPL    199  

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