hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-14064254/chunk_1/iprscan-20080808-14064254.nocrc
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Query sequence: eg00472
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00240                                                  36.9    2.8e-06   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00240    1/1     383   440 ..     1    49 []    36.9  2.8e-06

Alignments of top-scoring domains:
SM00240: domain 1 of 1, from 383 to 440: score 36.9, E = 2.8e-06
                   *->tvtiGRss..cdivlpsps......iSRrHaeiv.dgd...yliDlg
                      ++t+GR++++++i+++ +++++  +iSR++ +i+ +++++ ++ + g
     eg00472   383    EITLGRATkdNQIDVDLSLegpawkISRKQGVIKlKNNgdfFIANEG 429  

                   enSsNGTfVNgrrv<-*
                      +  ++++gr+v   
     eg00472   430 ---RRPIYIDGRPV    440  

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