hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-14130927/chunk_1/iprscan-20080808-14130927.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: eg01013 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF06292.8.ls Domain of Unknown Function (DUF1041) 330.4 3e-96 2 PF06292.8.fs Domain of Unknown Function (DUF1041) 326.7 3.8e-95 2 PF00168.20.fs C2 domain 208.4 2.1e-61 3 PF00168.20.ls C2 domain 214.2 2.8e-61 3 PF00130.12.fs Phorbol esters/diacylglycerol binding domain 65.4 1.8e-17 1 PF00130.12.ls Phorbol esters/diacylglycerol binding domain 67.3 4.5e-17 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00168.20.ls 1/3 33 108 .. 1 88 [] 38.6 1.9e-08 PF00168.20.fs 1/3 33 108 .. 1 88 [] 36.8 2.2e-10 PF00130.12.fs 1/1 507 559 .. 1 55 [] 65.4 1.8e-17 PF00130.12.ls 1/1 507 559 .. 1 55 [] 67.3 4.5e-17 PF00168.20.ls 2/3 631 722 .. 1 88 [] 110.0 6.6e-30 PF00168.20.fs 2/3 631 722 .. 1 88 [] 108.0 1.4e-31 PF06292.8.ls 1/2 946 1051 .. 1 121 [] 181.5 2e-51 PF06292.8.fs 1/2 946 1051 .. 1 121 [] 179.6 7.3e-51 PF06292.8.ls 2/2 1172 1262 .. 1 121 [] 148.9 1.2e-41 PF06292.8.fs 2/2 1172 1262 .. 1 121 [] 147.1 3.3e-41 PF00168.20.fs 3/3 1469 1559 .. 1 88 [] 63.6 2.3e-18 PF00168.20.ls 3/3 1469 1559 .. 1 88 [] 65.6 1.5e-16 Alignments of top-scoring domains: PF00168.20.ls: domain 1 of 3, from 33 to 108: score 38.6, E = 1.9e-08 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl L V+v++Ak + k ++YV++++ + +k T ++++ eg01013 33 LCVRVKRAKFQGS---PD-KFNTYVTLKVQN----VKSTTVAVRGD- 70 NPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* P W+++F+Fe L +eV++++ ++ d +G+v eg01013 71 QPSWEQDFMFE-ISRLDLG-LSVEVWNKGLIW-DTMVGTVW 108 PF00168.20.fs: domain 1 of 3, from 33 to 108: score 36.8, E = 2.2e-10 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl L V+v++Ak + k ++YV++++ + +k T ++++ eg01013 33 LCVRVKRAKFQGS---PD-KFNTYVTLKVQN----VKSTTVAVRGD- 70 NPvWNEtFtFevpppdlqetLeieVyDydrfgrddflGevs<-* P W+++F+Fe L +eV++++ ++ d +G+v eg01013 71 QPSWEQDFMFE-ISRLDLG-LSVEVWNKGLIW-DTMVGTVW 108 PF00130.12.fs: domain 1 of 1, from 507 to 559: score 65.4, E = 1.8e-17 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F++ t pt+C C+ +lwg +++qG++Cs+C++++H++C+ + eg01013 507 HNFEVW-TATTPTYCYECEGLLWG-IARQGMRCSECGVKCHEKCQDL 551 VppeCgcg<-* +++ C eg01013 552 LNADCLQR 559 PF00130.12.ls: domain 1 of 1, from 507 to 559: score 67.3, E = 4.5e-17 *->HhFvhrwtfkqptfCdhCgeflwgslgkqGlkCswCklnvHkrChek H+F++ t pt+C C+ +lwg +++qG++Cs+C++++H++C+ + eg01013 507 HNFEVW-TATTPTYCYECEGLLWG-IARQGMRCSECGVKCHEKCQDL 551 VppeCgcg<-* +++ C eg01013 552 LNADCLQR 559 PF00168.20.ls: domain 2 of 3, from 631 to 722: score 110.0, E = 6.6e-30 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +++tv++A++L +kD k+g+sDPYV+v++ + +kk+Tk+i ++l eg01013 631 ITITVVCAQGLQAKD-KTGSSDPYVTVQVSK----TKKRTKTIFGNL 672 NPvWNEtFtFevpppdlqetLeieVyDydrfgr...........ddflGe NPvW+E+F+Fe +++ ++ +++ V+D+d + +++ +++ ++++ddflG+ eg01013 673 NPVWEEKFHFE-CHNSSDR-IKVRVWDEDDDIKsrvkqrlkresDDFLGQ 720 vs<-* ++ eg01013 721 TI 722 PF00168.20.fs: domain 2 of 3, from 631 to 722: score 108.0, E = 1.4e-31 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkdqkkkTkvikktl +++tv++A++L +kD k+g+sDPYV+v++ + +kk+Tk+i ++l eg01013 631 ITITVVCAQGLQAKD-KTGSSDPYVTVQVSK----TKKRTKTIFGNL 672 NPvWNEtFtFevpppdlqetLeieVyDydrfgr...........ddflGe NPvW+E+F+Fe +++ ++ +++ V+D+d + +++ +++ ++++ddflG+ eg01013 673 NPVWEEKFHFE-CHNSSDR-IKVRVWDEDDDIKsrvkqrlkresDDFLGQ 720 vs<-* ++ eg01013 721 TI 722 PF06292.8.ls: domain 1 of 2, from 946 to 1051: score 181.5, E = 2e-51 *->ktvvkdclkaaarvwydfifenckieerm.fqvdqpgaqrvPRvpCI ++vvkdc+ka+++++y++if+nc++++++++q++q + +P eg01013 946 SQVVKDCVKACLNSTYEYIFNNCHDLYSRqYQLKQ---ELPP----- 984 LMNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqel +++++ ++l+++ +kLi+l++s+++e+++++++vLnqFpqel eg01013 985 ------EEQGPSIRNLDFW--PKLITLIVSIIEEDKNSYTPVLNQFPQEL 1026 nlgkesAedlwslfavdldsaleEq<-* n+gk+sAe +w+lfa+d+++aleE+ eg01013 1027 NVGKVSAEVMWHLFAQDMKYALEEH 1051 PF06292.8.fs: domain 1 of 2, from 946 to 1051: score 179.6, E = 7.3e-51 *->ktvvkdclkaaarvwydfifenckieerm.fqvdqpgaqrvPRvpCI ++vvkdc+ka+++++y++if+nc++++++++q++q + +P eg01013 946 SQVVKDCVKACLNSTYEYIFNNCHDLYSRqYQLKQ---ELPP----- 984 LMNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqel +++++ ++l+++ +kLi+l++s+++e+++++++vLnqFpqel eg01013 985 ------EEQGPSIRNLDFW--PKLITLIVSIIEEDKNSYTPVLNQFPQEL 1026 nlgkesAedlwslfavdldsaleEq<-* n+gk+sAe +w+lfa+d+++aleE+ eg01013 1027 NVGKVSAEVMWHLFAQDMKYALEEH 1051 PF06292.8.ls: domain 2 of 2, from 1172 to 1262: score 148.9, E = 1.2e-41 *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL kt+ k+++++a++ ++df+ ++ +e+ +pCIL eg01013 1172 KTIGKVLMQYADILSKDFPAYCT--KEK--------------LPCIL 1202 MNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqeln MNNvQqlrvqlek++e+mGG++L+ ++++ Lkelq+kln+vL+ eg01013 1203 MNNVQQLRVQLEKMFEAMGGKELDLEAADSLKELQVKLNTVLD------- 1245 lgkesAedlwslfavdldsaleEq<-* +l+++f+++++++++E+ eg01013 1246 -------ELSMVFGNSFQVRIDEC 1262 PF06292.8.fs: domain 2 of 2, from 1172 to 1262: score 147.1, E = 3.3e-41 *->ktvvkdclkaaarvwydfifenckieermfqvdqpgaqrvPRvpCIL kt+ k+++++a++ ++df+ ++ +e+ +pCIL eg01013 1172 KTIGKVLMQYADILSKDFPAYCT--KEK--------------LPCIL 1202 MNNvQqlrvqlekkledmGGikLielvisvLkelqeklnkvLnqFpqeln MNNvQqlrvqlek++e+mGG++L+ ++++ Lkelq+kln+vL+ eg01013 1203 MNNVQQLRVQLEKMFEAMGGKELDLEAADSLKELQVKLNTVLD------- 1245 lgkesAedlwslfavdldsaleEq<-* +l+++f+++++++++E+ eg01013 1246 -------ELSMVFGNSFQVRIDEC 1262 PF00168.20.fs: domain 3 of 3, from 1469 to 1559: score 63.6, E = 2.3e-18 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk..kkTkvik ++V+v+ A++L+ + g+ P+V+v++ g ++ ++k+++ Tk + eg01013 1469 VTVKVVAANDLKW-Q-TAGMFRPFVEVTMVGPHQSdKKrkFTTKSKS 1513 ktlNPvWNEtFtFevpppdlqe..tLeieVyDydrfgrddflGevs<-* +++ P++NEtF+F + +++ e+ +L+i V+Dy + d +lG ++ eg01013 1514 NNWAPKYNETFHFLLGNEEGPEsyELQICVKDYYFAREDRVLGLAV 1559 PF00168.20.ls: domain 3 of 3, from 1469 to 1559: score 65.6, E = 1.5e-16 *->LrVtvieAknLppkDkkngksDPYVkvylggdkkd.qk..kkTkvik ++V+v+ A++L+ + g+ P+V+v++ g ++ ++k+++ Tk + eg01013 1469 VTVKVVAANDLKW-Q-TAGMFRPFVEVTMVGPHQSdKKrkFTTKSKS 1513 ktlNPvWNEtFtFevpppdlqe..tLeieVyDydrfgrddflGevs<-* +++ P++NEtF+F + +++ e+ +L+i V+Dy + d +lG ++ eg01013 1514 NNWAPKYNETFHFLLGNEEGPEsyELQICVKDYYFAREDRVLGLAV 1559 //