hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-14263910/chunk_1/iprscan-20080808-14263910.nocrc
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Query sequence: eg01036
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00558                                                 258.3      6e-73   1
SM00249                                                 155.4    5.9e-42   3
SM00501                                                 120.6    1.7e-31   1
SM00545                                                  84.2    1.5e-20   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00545    1/1      59   100 ..     1    45 []    84.2  1.5e-20
SM00501    1/1     126   216 ..     1    95 []   120.6  1.7e-31
SM00249    1/3     336   382 ..     1    39 []    64.5  1.4e-14
SM00558    1/1     478   644 ..     1   214 []   258.3    6e-73
SM00249    2/3    1204  1257 ..     1    39 []    53.4    3e-11
SM00249    3/3    1655  1700 ..     1    39 []    37.5  1.8e-06

Alignments of top-scoring domains:
SM00545: domain 1 of 1, from 59 to 100: score 84.2, E = 1.5e-20
                   *->eiPvfyPteeEFkDplaYIskIrpqgGeAekyGIvKvVPPknWkP<-
                      e+Pvf+P++eEF Dpl++I +Irp   +Aek GI+K+ PPk+W+P  
     eg01036    59    ECPVFEPSWEEFTDPLSFIGRIRP---LAEKTGICKIRPPKDWQP   100  

                   *
                    
     eg01036     -   -    

SM00501: domain 1 of 1, from 126 to 216: score 120.6, E = 1.7e-31
                   *->rerelFldrLykFmeergtpilkiPviggkpklDLyrLyrlVkerGG
                      r r  Fld+L kF+e +g+ +lkiPv+++k+ lDLy L ++V ++GG
     eg01036   126    RVRLDFLDQLAKFWELQGS-TLKIPVVERKI-LDLYALSKIVASKGG 170  

                   ydaVtkdkkWkeiaeelgipdtistsasssLrkhYlryLlpfEeflrg<-
                   ++ Vtk kkW++++ +lg+ +  ++  +s L++hY+r+L+p+E f +g  
     eg01036   171 FEMVTKEKKWSKVGSRLGYLP--GKGTGSLLKSHYERILYPYELFQSG   216  

                   *
                    
     eg01036     -   -    

SM00249: domain 1 of 3, from 336 to 382: score 64.5, E = 1.4e-14
                   *->yC.vCgk....g.llqCdkgCdrwyHv.Clgpple.epdg.wyCprC
                      +C +Cg+++++++ll+Cd gCd++yH+ Cl ppl+++p+g+w+Cp+C
     eg01036   336    VCmFCGRgnneDkLLLCD-GCDDSYHTfCLIPPLPdVPKGdWRCPKC 381  

                   k<-*
                   +   
     eg01036   382 V    382  

SM00558: domain 1 of 1, from 478 to 644: score 258.3, E = 6e-73
                   *->lylqqlwnlaklPffeytdpkpksgklnllsdlpkerywedilgpdv
                      +y+   wnl+++P          ++++++l++++     +di+g+ v
     eg01036   478    EYALSGWNLNNMP----------VLEQSVLAHIN-----VDISGMKV 509  

                   gkPkpkpylymGmaEsrgstTpwHiDdydlySvNylhqgagedGKrWyli
                         p+ly+Gm+   +s+++wHi+d+++yS+Nylh+g++   K+Wy++
     eg01036   510 ------PWLYVGMC---FSSFCWHIEDHWSYSINYLHWGEP---KTWYGV 547  

                   Ppedaeklekllkkhgkefhistapdlfkeqpdllihlstwispevlkkr
                   P + ae+le++++++        ap+lf++qpdll++l+t ++p vl ++
     eg01036   548 PSHAAEQLEEVMREL--------APELFESQPDLLHQLVTIMNPNVLMEH 589  

                   lkeeperPlfqgvpvyrfvQkpGefvfiPpGwyHaVfnlGkfniavavNF
                   +           vpvyr++Q++Gefv+++p++yH++fn G +n+a+avNF
     eg01036   590 G-----------VPVYRTNQCAGEFVVTFPRAYHSGFNQG-YNFAEAVNF 627  

                   aspewlpmglrlveelr<-*
                   ++ +wlp+g ++v+++r   
     eg01036   628 CTADWLPIGRQCVNHYR    644  

SM00249: domain 2 of 3, from 1204 to 1257: score 53.4, E = 3e-11
                   *->yCvCgk...g.llqCdkgCdrwyHv.Clgpple..........epdg
                      +C+C+k+ +g +lqC+  C++w+H +C+ +p++++++++++ ++++ 
     eg01036  1204    FCICRKtasGfMLQCE-LCKDWFHNsCVPLPKSssqkkgsswqAKEV 1249 

                   .wyCprCk<-*
                   +++Cp C    
     eg01036  1250 kFLCPLCM    1257 

SM00249: domain 3 of 3, from 1655 to 1700: score 37.5, E = 1.8e-06
                   *->yC..vCgk.g.llqCdkgCdrwyHv.Clgpple.epdg.wyCprCk<
                       C++ C+++ +++qCd+gCd w+H+ C+g ++e +++++++C +C  
     eg01036  1655    NCqrPCKDkVdWVQCDGGCDEWFHQvCVGVSPEmAENEdYICINCA  1700 

                   -*
                     
     eg01036     -    -    

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