hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-14452979/chunk_1/iprscan-20080808-14452979.nocrc
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Query sequence: eg01092
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00552                                                 723.0   8.1e-213   1
SM00358                                                 237.3    1.3e-66   3
SM00550                                                 235.1      6e-66   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00550    1/2     150   219 ..     1    72 []   117.1  1.9e-30
SM00550    2/2     309   377 ..     1    72 []   118.0  1.1e-30
SM00358    1/3     522   588 ..     1    68 []    87.3  1.8e-21
SM00358    2/3     633   699 ..     1    68 []    76.0  4.7e-18
SM00358    3/3     745   811 ..     1    68 []    74.0  1.8e-17
SM00552    1/1     857  1240 ..     1   451 []   723.0 8.1e-213

Alignments of top-scoring domains:
SM00550: domain 1 of 2, from 150 to 219: score 117.1, E = 1.9e-30
                   *->slsltmdeleekiLefLensGe.dtvtAkqLAKnLglpKkkevNrvL
                      +ls+++d+ e++iL+fLe++Ge++++tA+ L  +Lg pKk e+NrvL
     eg01092   150    ELSIYQDQ-EQRILKFLEELGEgKATTAHDLSGKLGTPKK-EINRVL 194  

                   YsLekkgkvckqggVtPPlWkltsea<-*
                   YsL kkgk++k+ g tPPlWk++ ++   
     eg01092   195 YSLAKKGKLQKEAG-TPPLWKIAVST    219  

SM00550: domain 2 of 2, from 309 to 377: score 118.0, E = 1.1e-30
                   *->slsltmdeleekiLefLensGedtvtAkqLAKnLglpKkkevNrvLY
                       ++l+m+e++eki+++L+n++   ++A++LAKn+gl+K++++N+vL+
     eg01092   309    LEFLDMAEIKEKICDYLFNVS--DSSALNLAKNIGLTKARDINAVLI 353  

                   sLekkgkvckqggVtPPlWkltsea<-*
                   ++e++g+v++qg+ tPP+W+lt+++   
     eg01092   354 DMERQGDVYRQGT-TPPIWHLTDKK    377  

SM00358: domain 1 of 3, from 522 to 588: score 87.3, E = 1.8e-21
                   *->pkslLqElaqkrglplpeYelvkeeGpdHaprFtvtvkvggkitgeG
                      p+s L E+aq  +  ++e+  ++++Gp+H prF+++v+++g++++++
     eg01092   522    PISGLLEYAQFASQ-TCEFNMIEQSGPPHEPRFKFQVVINGREFPPA 567  

                   eGsSKKeAkqaAAeaALrkLk<-*
                   e+ SKK+Akq AA++A  +L    
     eg01092   568 EAGSKKVAKQDAAMKAMTILL    588  

SM00358: domain 2 of 3, from 633 to 699: score 76.0, E = 4.7e-18
                   *->pkslLqElaqkrglplpeYelvkeeGpdHaprFtvtvkvggkitgeG
                      p++ L E+ +k g   +e++l++ eGp+H p+F+++v vg +++++ 
     eg01092   633    PVTTLLECMHKLGN-SCEFRLLSKEGPAHEPKFQYCVAVGAQTFPSV 678  

                   eGsSKKeAkqaAAeaALrkLk<-*
                   +++SKK+Akq AAe A ++L    
     eg01092   679 SAPSKKVAKQMAAEEAMKALH    699  

SM00358: domain 3 of 3, from 745 to 811: score 74.0, E = 1.8e-17
                   *->pkslLqElaqkrglplpeYelvkeeGpdHaprFtvtvkvggkitgeG
                      p+  L E+a+ +g+   e++lv+++Gp+H p+F++++kvgg +++++
     eg01092   745    PVGGLLEYARSHGF-AAEFKLVDQSGPPHEPKFVYQAKVGG-RWFPA 789  

                   eGs.SKKeAkqaAAeaALrkLk<-*
                   +  +SKK+ kq+AA aALr L    
     eg01092   790 VCAhSKKQGKQEAADAALRVLI    811  

SM00552: domain 1 of 1, from 857 to 1240: score 723.0, E = 8.1e-213
                   *->dladeIsqlvlekFsiLkrasLpkkgkpglrewkvLAgvvmtngsdd
                      +++d+I++l++++F+     +L+++++p+l+++k+LA+++m+++s+d
     eg01092   857    TFHDQIAMLSHRCFN-----TLTNSFQPSLLGRKILAAIIMKKDSED 898  

                   aKaCdTpdkpvaeeaqVvsLgTGtKCisgsieklspnGlvLnDcHAEIlA
                                ++ VvsLgTG++C++g  + ls +G+++nDcHAEI++
     eg01092   899 -------------MGVVVSLGTGNRCVKG--DSLSLKGETVNDCHAEIIS 933  

                   RRgllRfLYseLqlflsskGpedaedSIFeknkeggpGEvkykLKsnvlF
                   RRg++RfLYseL++++s++    a+dSIFe++k g+    k+++K+ v+F
     eg01092   934 RRGFIRFLYSELMKYNSQT----AKDSIFEPAKGGE----KLQIKKTVSF 975  

                   HLYiStaPCGDAsifsplealkniestqvdsskhpnrknikrsklrtkie
                   HLYiStaPCGD+++f+++++++++est+  s+++p+++n+k++klrtk+e
     eg01092   976 HLYISTAPCGDGALFDKSCSDRAMESTE--SRHYPVFENPKQGKLRTKVE 1023 

                   igegtvpgggvkssdiVqTwdGilqGerllsMSCSDKiaRWNVLGvQGAL
                   +gegt+p   v+ssdiV+TwdGi++Gerl++MSCSDKi+RWNVLG+QGAL
     eg01092  1024 NGEGTIP---VESSDIVPTWDGIRLGERLRTMSCSDKILRWNVLGLQGAL 1070 

                   LshfiekPIYLsSIvlGkeslysaehLeRAlygRlendgnerealidglp
                   L+hf++ PIYL+S++lG  +l+s++hL+RA+++R+++dg+   a++dgl+
     eg01092  1071 LTHFLQ-PIYLKSVTLG--YLFSQGHLTRAICCRVTRDGS---AFEDGLR 1114 

                   tpfrvnrPlislvsvadfEysrkldqrqtakspnflVPCASvnWslgDes
                   +pf vn+P++++vs++d+       +rq +k++++     SvnW+l+D++
     eg01092  1115 HPFIVNHPKVGRVSIYDS-------KRQSGKTKET-----SVNWCLADGY 1152 

                   QTeleilngltGkvqgkdkktkslgsaSrlCKkalfrlfqkLlsklkrdd
                     +leil+g++G+v+      ++++++Sr++Kk++f+lf+kL+s+++r+d
     eg01092  1153 --DLEILDGTRGTVD------GPRNELSRVSKKNIFLLFKKLCSFRYRRD 1194 

                   llkalrlsdlRisYaeaKeaaseYqeaKqllfealkkaglGsWikKPpeq
                   ll+         sY+eaK+aa++Y++aK+++++ lk++g+G+Wi+KP+e+
     eg01092  1195 LLR--------LSYGEAKKAARDYETAKNYFKKGLKDMGYGNWISKPQEE 1236 

                   dqFk<-*
                   ++F+   
     eg01092  1237 KNFY    1240 

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