hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-15045768/chunk_1/iprscan-20080808-15045768.nocrc
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Query sequence: eg01310
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 190.0    2.3e-52   7
SM00349                                                 118.6      7e-31   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00349      1/1      13    73 ..     1    62 []   118.6    7e-31
SM00355      1/7     216   238 ..     1    23 []    19.7      0.4
SM00355      2/7     244   266 ..     1    23 []    28.6  0.00084
SM00355      3/7     272   294 ..     1    23 []    27.2   0.0023
SM00355      4/7     300   322 ..     1    23 []    29.5  0.00045
SM00355      5/7     328   350 ..     1    23 []    27.4    0.002
SM00355      6/7     356   378 ..     1    23 []    28.0   0.0013
SM00355      7/7     384   406 ..     1    23 []    29.5  0.00046

Alignments of top-scoring domains:
SM00349: domain 1 of 1, from 13 to 73: score 118.6, E = 7e-31
                   *->VtFeDVAVdFsqEEWeqLDpaQrnLYRdVMlENYsnLvSLGgfqvsk
                      +tFeDVAV+Fsq EW+qL paQ++LYR+VMlEN++nL+ LG + vsk
     eg01310    13    MTFEDVAVEFSQWEWGQLNPAQKDLYREVMLENFRNLAILG-LLVSK 58   

                   pdliskLEqgeEpwi<-*
                   p +i++LE+g Ep +   
     eg01310    59 PYVICQLEEGGEPFM    73   

SM00355: domain 1 of 7, from 216 to 238: score 19.7, E = 0.4
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                       kC++ Cgksf+ +++L+rH+r H   
     eg01310   216    CKCNE-CGKSFHFQsELRRHQRCH    238  

SM00355: domain 2 of 7, from 244 to 266: score 28.6, E = 0.00084
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C+  Cg+ f + ++L++H+r+H   
     eg01310   244    YECSD-CGRAFGHIsSLIKHQRTH    266  

SM00355: domain 3 of 7, from 272 to 294: score 27.2, E = 0.0023
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cg+ fs+ ++L+ H+r H   
     eg01310   272    YECSE-CGRAFSQSsSLVLHYRFH    294  

SM00355: domain 4 of 7, from 300 to 322: score 29.5, E = 0.00045
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cg+ f + ++L++H+r+H   
     eg01310   300    YKCNE-CGRAFGHTsSLIKHQRTH    322  

SM00355: domain 5 of 7, from 328 to 350: score 27.4, E = 0.002
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cg++fs+ ++L+ H+r H   
     eg01310   328    YECRE-CGRTFSQSsSLIVHYRFH    350  

SM00355: domain 6 of 7, from 356 to 378: score 28.0, E = 0.0013
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cg+ fs+ ++L++H+r H   
     eg01310   356    YKCNK-CGRAFSQSsSLTQHYRFH    378  

SM00355: domain 7 of 7, from 384 to 406: score 29.5, E = 0.00046
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ Cg+ f +  +L++H+r+H   
     eg01310   384    YKCNE-CGRAFAHTaSLIKHQRSH    406  

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