hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20090525/iprscan-20090525-13331005/chunk_1/iprscan-20090525-13331005.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: eg01330 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00369 328.0 6.5e-94 17 SM00181 294.8 6.3e-84 9 SM00082 178.0 9.2e-49 4 SM00013 168.9 5.1e-46 4 SM00282 147.6 1.3e-39 1 SM00179 139.2 4.5e-37 7 SM00274 30.5 0.00024 3 SM00041 25.4 0.00042 1 SM00365 28.5 0.0009 6 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00013 1/4 60 92 .. 1 38 [] 45.2 8.8e-09 SM00369 1/17 86 110 .. 1 24 [] 6.6 64 SM00369 2/17 111 134 .. 1 24 [] 23.5 0.029 SM00369 3/17 135 158 .. 1 24 [] 17.7 1.6 SM00369 4/17 159 182 .. 1 24 [] 18.2 1.2 SM00369 5/17 187 206 .. 1 24 [] 3.6 1.5e+02 SM00369 6/17 207 230 .. 1 24 [] 23.8 0.024 SM00082 1/4 242 291 .. 1 55 [] 46.1 4.7e-09 SM00013 2/4 305 337 .. 1 38 [] 42.4 6.2e-08 SM00369 7/17 331 355 .. 1 24 [] 5.6 87 SM00369 8/17 356 379 .. 1 24 [] 23.0 0.041 SM00365 1/6 356 377 .. 1 22 [] 4.0 2.6e+02 SM00369 9/17 380 403 .. 1 24 [] 27.0 0.0026 SM00369 10/17 404 427 .. 1 24 [] 17.8 1.5 SM00365 2/6 428 446 .. 1 22 [] 0.2 7.8e+02 SM00369 11/17 428 451 .. 1 24 [] 22.3 0.07 SM00082 2/4 463 512 .. 1 55 [] 37.0 2.6e-06 SM00013 3/4 538 570 .. 1 38 [] 38.8 7.4e-07 SM00365 3/6 590 611 .. 1 22 [] 1.7 5e+02 SM00369 12/17 590 613 .. 1 24 [] 27.7 0.0017 SM00365 4/6 638 659 .. 1 22 [] 12.3 25 SM00369 13/17 638 661 .. 1 24 [] 18.7 0.82 SM00365 5/6 662 683 .. 1 22 [] 0.4 7.2e+02 SM00369 14/17 662 685 .. 1 24 [] 21.2 0.15 SM00082 3/4 697 746 .. 1 55 [] 35.7 6.3e-06 SM00013 4/4 759 791 .. 1 38 [] 42.5 5.5e-08 SM00365 6/6 809 830 .. 1 22 [] 10.0 48 SM00369 15/17 809 832 .. 1 24 [] 13.8 8.6 SM00369 16/17 833 856 .. 1 24 [] 29.0 0.00066 SM00369 17/17 857 880 .. 1 24 [] 28.5 0.0009 SM00082 4/4 892 941 .. 1 55 [] 59.2 5.1e-13 SM00179 1/7 951 988 .. 1 34 [] 5.5 0.35 SM00181 1/9 954 988 .. 1 32 [] 32.5 5.9e-05 SM00181 2/9 993 1029 .. 1 32 [] 35.7 6.1e-06 SM00179 2/7 994 1029 .. 1 34 [] 1.4 1.1 SM00179 3/7 1031 1067 .. 1 34 [] 39.2 5.4e-07 SM00274 1/3 1034 1056 .. 1 25 [] 2.0 1e+02 SM00181 3/9 1034 1067 .. 1 32 [] 34.2 1.8e-05 SM00179 4/7 1069 1107 .. 1 34 [] 23.6 0.002 SM00181 4/9 1072 1107 .. 1 32 [] 34.3 1.6e-05 SM00179 5/7 1109 1145 .. 1 34 [] 45.6 6.6e-09 SM00181 5/9 1112 1145 .. 1 32 [] 37.8 1.4e-06 SM00181 6/9 1157 1190 .. 1 32 [] 34.9 1.1e-05 SM00274 2/3 1157 1179 .. 1 25 [] 17.5 1.5 SM00179 6/7 1160 1190 .. 1 34 [] 11.2 0.068 SM00282 1/1 1213 1349 .. 1 137 [] 147.6 1.3e-39 SM00181 7/9 1368 1401 .. 1 32 [] 34.1 1.9e-05 SM00179 7/7 1369 1401 .. 1 34 [] 12.7 0.045 SM00181 8/9 1407 1440 .. 1 32 [] 26.0 0.0051 SM00274 3/3 1448 1470 .. 1 25 [] 10.9 8.9 SM00181 9/9 1448 1481 .. 1 32 [] 25.3 0.0086 SM00041 1/1 1492 1561 .. 1 94 [] 25.4 0.00042 Alignments of top-scoring domains: SM00013: domain 1 of 4, from 60 to 92: score 45.2, E = 8.8e-09 *->qCPapCtCspdfgtaVdCsgrgLttlevPldlPadttl<-* +CPa+C Cs g++VdC+g+ L+ +vP+ +P++t+ eg01330 60 ACPAQCSCS---GSTVDCHGLALR--SVPRNIPRNTER 92 SM00369: domain 1 of 17, from 86 to 110: score 6.6, E = 64 *->LpnL.reLdLsnNqLtsLPpgaFqg<-* p +++LdL++N++t++ F+g eg01330 86 IPRNtERLDLNGNNITRITKTDFAG 110 SM00369: domain 2 of 17, from 111 to 134: score 23.5, E = 0.029 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L++Lr+L L N+++++ +gaFq+ eg01330 111 LRHLRVLQLMENKISTIERGAFQD 134 SM00369: domain 3 of 17, from 135 to 158: score 17.7, E = 1.6 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L +L++L+L++N+L+ P+ +F g eg01330 135 LKELERLRLNRNHLQLFPELLFLG 158 SM00369: domain 4 of 17, from 159 to 182: score 18.2, E = 1.2 *->LpnLreLdLsnNqLtsLPpgaFqg<-* +L +LdLs Nq++++P+ aF+g eg01330 159 TAKLYRLDLSENQIQAIPRKAFRG 182 SM00369: domain 5 of 17, from 187 to 206: score 3.6, E = 1.5e+02 *->LpnLreLdLsnNqLtsLPpgaFqg<-* + L L++Nq++ + +gaF+ eg01330 187 ----KNLQLDYNQISCIEDGAFRA 206 SM00369: domain 6 of 17, from 207 to 230: score 23.8, E = 0.024 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L+ L++L L+nN++t+L F++ eg01330 207 LRDLEVLTLNNNNITRLSVASFNH 230 SM00082: domain 1 of 4, from 242 to 291: score 46.1, E = 4.7e-09 *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll N ++CDC+L+wL +wl++ + ++ ++C +P++lrG ++++ eg01330 242 NNLYCDCHLAWLSDWLRQ--RPRVGL---YTQCMGPSHLRGHNVAEV 283 lpsefsCp<-* + ef+C+ eg01330 284 QKREFVCS 291 SM00013: domain 2 of 4, from 305 to 337: score 42.4, E = 6.2e-08 *->qCPapCtCspdfgtaVdCsgrgLttlevPldlPadttl<-* +CPa CtCs VdC+g+gLt e+P lP+ +t+ eg01330 305 HCPAACTCS---NNIVDCRGKGLT--EIPTNLPETITE 337 SM00369: domain 7 of 17, from 331 to 355: score 5.6, E = 87 *->LpnL.reLdLsnNqLtsLPpgaFqg<-* Lp+ +e +L+ N ++ +PpgaF++ eg01330 331 LPETiTEIRLEQNTIKVIPPGAFSP 355 SM00369: domain 8 of 17, from 356 to 379: score 23.0, E = 0.041 *->LpnLreLdLsnNqLtsLPpgaFqg<-* +Lr+ dLsnNq+++L p+aFqg eg01330 356 YKKLRRIDLSNNQISELAPDAFQG 379 SM00365: domain 1 of 6, from 356 to 377: score 4.0, E = 2.6e+02 *->LtnLeeLdLsqNkIkkiENLde<-* ++L+ +dLs+N+I+ + eg01330 356 YKKLRRIDLSNNQISELAPDAF 377 SM00369: domain 9 of 17, from 380 to 403: score 27.0, E = 0.0026 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L++L +L L +N++t+LP +F+g eg01330 380 LRSLNSLVLYGNKITELPKSLFEG 403 SM00369: domain 10 of 17, from 404 to 427: score 17.8, E = 1.5 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L +L+ L L+ N++ L +aFq+ eg01330 404 LFSLQLLLLNANKINCLRVDAFQD 427 SM00365: domain 2 of 6, from 428 to 446: score 0.2, E = 7.8e+02 *->LtnLeeLdLsqNkIkkiENLde<-* L+nL L+L++Nk+ + + + eg01330 428 LHNLNLLSLYDNKL---QTIAK 446 SM00369: domain 11 of 17, from 428 to 451: score 22.3, E = 0.07 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L+nL L+L +N+L+++ g+F++ eg01330 428 LHNLNLLSLYDNKLQTIAKGTFSP 451 SM00082: domain 2 of 4, from 463 to 512: score 37.0, E = 2.6e-06 *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll NPf+CDC+L+wL++ l+ ++ + +rC+sP +l+ +++ eg01330 463 NPFICDCHLKWLADYLHT---NPIETS--GARCTSPRRLANKRIGQI 504 lpsefsCp<-* + f C+ eg01330 505 KSKKFRCS 512 SM00013: domain 3 of 4, from 538 to 570: score 38.8, E = 7.4e-07 *->qCPapCtCspdfgtaVdCsgrgLttlevPldlPadttl<-* +CP C+C+ gt+VdCs+++L ++P +P t + eg01330 538 ACPEKCRCE---GTTVDCSNQKLN--KIPEHIPQYTAE 570 SM00365: domain 3 of 6, from 590 to 611: score 1.7, E = 5e+02 *->LtnLeeLdLsqNkIkkiENLde<-* L +L+ + +s+NkI+ iE eg01330 590 LPQLRKINFSNNKITDIEEGAF 611 SM00369: domain 12 of 17, from 590 to 613: score 27.7, E = 0.0017 *->LpnLreLdLsnNqLtsLPpgaFqg<-* Lp+Lr+ + snN++t + +gaF+g eg01330 590 LPQLRKINFSNNKITDIEEGAFEG 613 SM00365: domain 4 of 6, from 638 to 659: score 12.3, E = 25 *->LtnLeeLdLsqNkIkkiENLde<-* L L++L L++N+I+++ N + eg01330 638 LESLKTLMLRSNRITCVGNDSF 659 SM00369: domain 13 of 17, from 638 to 661: score 18.7, E = 0.82 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L +L++L L +N++t + ++ F g eg01330 638 LESLKTLMLRSNRITCVGNDSFIG 661 SM00365: domain 5 of 6, from 662 to 683: score 0.4, E = 7.2e+02 *->LtnLeeLdLsqNkIkkiENLde<-* L+ ++ L+L++N+I+ + eg01330 662 LSSVRLLSLYDNQITTVAPGAF 683 SM00369: domain 14 of 17, from 662 to 685: score 21.2, E = 0.15 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L++ r L+L +Nq+t++ pgaF+ eg01330 662 LSSVRLLSLYDNQITTVAPGAFDT 685 SM00082: domain 3 of 4, from 697 to 746: score 35.7, E = 6.3e-06 *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll NPfnC+C L+wL +wl++ +++ ++rC P l+ + + eg01330 697 NPFNCNCYLAWLGEWLRK---KRIVTG--NPRCQKPYFLKE-IPIQD 737 lp.sefsCp<-* ++ ++f+C+ eg01330 738 VAiQDFTCD 746 SM00013: domain 4 of 4, from 759 to 791: score 42.5, E = 5.5e-08 *->qCPapCtCspdfgtaVdCsgrgLttlevPldlPadttl<-* CP +CtC +t+V Cs++gL+ +P+++P+d+t+ eg01330 759 RCPTECTCL---DTVVRCSNKGLK--VLPKGIPRDVTE 791 SM00365: domain 6 of 6, from 809 to 830: score 10.0, E = 48 *->LtnLeeLdLsqNkIkkiENLde<-* ++L+ +dLs+N+I+ ++N + eg01330 809 YKHLTLIDLSNNRISTLSNQSF 830 SM00369: domain 15 of 17, from 809 to 832: score 13.8, E = 8.6 *->LpnLreLdLsnNqLtsLPpgaFqg<-* +L+ dLsnN++++L ++ F++ eg01330 809 YKHLTLIDLSNNRISTLSNQSFSN 832 SM00369: domain 16 of 17, from 833 to 856: score 29.0, E = 0.00066 *->LpnLreLdLsnNqLtsLPpgaFqg<-* +++L +L Ls+N+L+ +Pp++F+g eg01330 833 MTQLLTLILSYNRLRCIPPRTFDG 856 SM00369: domain 17 of 17, from 857 to 880: score 28.5, E = 0.0009 *->LpnLreLdLsnNqLtsLPpgaFqg<-* L +Lr L+L++N ++ +P+gaF++ eg01330 857 LKSLRLLSLHGNDISVVPEGAFND 880 SM00082: domain 4 of 4, from 892 to 941: score 59.2, E = 5.1e-13 *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll NP++CDC+++wL +w++ e+ ++ +rCa+P+++++ +lll eg01330 892 NPLYCDCNMQWLSDWVKS---EYKEPG--IARCAGPGEMAD-KLLLT 932 lp.sefsCp<-* +p++ f+C+ eg01330 933 TPsKKFTCQ 941 SM00179: domain 1 of 7, from 951 to 988: score 5.5, E = 0.35 *->DiDEC...pCqnGGptgtCiN..vGSYrC.CppGyt.rnCe<-* + C ++pC n G tC ++v YrC+Cp G+ ++ C+ eg01330 951 KCNPClsnPCKNDG---TCNSdpVDFYRCtCPYGFKgQDCD 988 SM00181: domain 1 of 9, from 954 to 988: score 32.5, E = 5.9e-05 *->eCa..pCsnGgtEqnGtCi.....sytC.CpgpGytg.rCe<-* +C+++pC n+ GtC +++ + y+C+Cp G++g+ C eg01330 954 PCLsnPCKND-----GTCNsdpvdFYRCtCP-YGFKGqDCD 988 SM00181: domain 2 of 9, from 993 to 1029: score 35.7, E = 6.1e-06 *->eCa..pCsnGgtEqnGtCi.......sytC.CpgpGytg.rCe<-* C ++pC +G GtC+ ++++++++ C C+ +G++g++Ce eg01330 993 ACIsnPCKHG-----GTCHlkegeedGFWCiCA-DGFEGeNCE 1029 SM00179: domain 2 of 7, from 994 to 1029: score 1.4, E = 1.1 *->DiDEC...pCqnGGptgtCi...N.vGSYrC.CppGyt.rnCe<-* C ++pC +GG tC+ ++ ++ ++ C C +G+++ nCe eg01330 994 ----CisnPCKHGG---TCHlkeGeEDGFWCiCADGFEgENCE 1029 SM00179: domain 3 of 7, from 1031 to 1067: score 39.2, E = 5.4e-07 *->DiDEC...pCqnGGptgtCiN.vGSYrC.CppGyt.rnCe<-* ++D+C+++ C n++ tC+++++ Y+C Cpp yt+ Ce eg01330 1031 NVDDCednDCENNS---TCVDgINNYTClCPPEYTgELCE 1067 SM00274: domain 1 of 3, from 1034 to 1056: score 2.0, E = 1e+02 *->tCenvqCpfGkvCvvdakngearCv<-* Ce+ C++ ++Cv ++ +C+ eg01330 1034 DCEDNDCENNSTCVD--GINNYTCL 1056 SM00181: domain 3 of 9, from 1034 to 1067: score 34.2, E = 1.8e-05 *->eCa..pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-* +C++++C+n+ tC+++ + ytC Cp p ytg+ Ce eg01330 1034 DCEdnDCENNS-----TCVdginNYTClCP-PEYTGeLCE 1067 SM00179: domain 4 of 7, from 1069 to 1107: score 23.6, E = 0.002 *->DiDEC.....pCqnGGptgtCiN.vGSYrC.CppGyt.rnCe<-* D C ++ +pCq+ + +Ci ++ +++C+C pGy + +C+ eg01330 1069 KLDFCaqdlnPCQHDS---KCILtPKGFKCdCTPGYVgEHCD 1107 SM00181: domain 4 of 9, from 1072 to 1107: score 34.3, E = 1.6e-05 *->eCa....pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-* Ca++ +pC+++ +Ci ++++++C+C pGy g++C eg01330 1072 FCAqdlnPCQHDS-----KCIltpkGFKCdCT-PGYVGeHCD 1107 SM00179: domain 5 of 7, from 1109 to 1145: score 45.6, E = 6.6e-09 *->DiDEC...pCqnGGptgtCiN.vGSYrC.CppGyt.rnCe<-* D D+C+++ C nG+ +C++ v++Y+C Cp+Gy++ Ce eg01330 1109 DFDDCqdnKCKNGA---HCTDaVNGYTCiCPEGYSgLFCE 1145 SM00181: domain 5 of 9, from 1112 to 1145: score 37.8, E = 1.4e-06 *->eCa..pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-* +C+++ C nG ++C++ ++ytC Cp +Gy+g Ce eg01330 1112 DCQdnKCKNG-----AHCTdavnGYTCiCP-EGYSGlFCE 1145 SM00181: domain 6 of 9, from 1157 to 1190: score 34.9, E = 1.1e-05 *->eCa..pCsnGgtEqnGtCi....sytC.CpgpGytg.rCe<-* +C++ +C+nG ++Ci + + + C+C pGy+g+ Ce eg01330 1157 PCDnfDCQNG-----AQCIvrinEPICqCL-PGYQGeKCE 1190 SM00274: domain 2 of 3, from 1157 to 1179: score 17.5, E = 1.5 *->tCenvqCpfGkvCvvdakngearCv<-* +C+n+ C +G+ C v +e+ C eg01330 1157 PCDNFDCQNGAQCIV--RINEPICQ 1179 SM00179: domain 6 of 7, from 1160 to 1190: score 11.2, E = 0.068 *->DiDECpCqnGGptgtCiN.vGSYrC.CppGyt.rnCe<-* + D CqnG+ +Ci +++ C+C pGy++ Ce eg01330 1160 NFD---CQNGA---QCIVrINEPICqCLPGYQgEKCE 1190 SM00282: domain 1 of 1, from 1213 to 1349: score 147.6, E = 1.3e-39 *->t.lsisfsFrTtspnGlLlyagggdflaleLvlEDsdgdGrlvlryd ++++i++++ T++++G+Lly g++d++a+eL+ +Gr++ +yd eg01330 1213 PqTNITLQIATDEDSGILLYKGDKDHIAVELY------RGRVRASYD 1253 lGssttggparltsdsdrptplnDGqWHrVsverngrsvtLsVDggnpvs +Gs +pa+ ++ +++nDG +H V++ ++s++LsVDggnp eg01330 1254 TGS----HPASAIYSV---ETINDGNFHIVELLALDQSLSLSVDGGNPKI 1296 ges....t.LdldkeesgplylGGlPe...........lpvspgFrGCir ++ +++++L++d +ply+GG+P +++ + ++ ++ + ++F+GCir eg01330 1297 ITNlskqStLNFD----SPLYVGGMPGksnvaslrqapGQNGTSFHGCIR 1342 nlrvngk<-* nl++n++ eg01330 1343 NLYINSE 1349 SM00181: domain 7 of 9, from 1368 to 1401: score 34.1, E = 1.9e-05 *->eCa..pCsnGgtEqnGtCi.....sytC.CpgpGytg.rCe<-* +C+++ C +G tC++++ ++tC+C+ +G++g+ C eg01330 1368 PCHkkVCAHG------TCQpssqaGFTCeCQ-EGWMGpLCD 1401 SM00179: domain 7 of 7, from 1369 to 1401: score 12.7, E = 0.045 *->DiDEC...pCqnGGptgtCiN..vGSYrC.CppGyt.rnCe<-* C++++C +G tC+ ++ +++C+C++G++++ C+ eg01330 1369 ----ChkkVCAHG----TCQPssQAGFTCeCQEGWMgPLCD 1401 SM00181: domain 8 of 9, from 1407 to 1440: score 26.0, E = 0.0051 *->eCa..pCsnGgtEqnGtCi.....sytC.CpgpGytg.rCe<-* +C+++ C +G tC++ + sy+C+C +G g C eg01330 1407 PCLgnKCVHG------TCLpinafSYSCkCL-EGHGGvLCD 1440 SM00274: domain 3 of 3, from 1448 to 1470: score 10.9, E = 8.9 *->tCenvqCpfGkvCvvdakngearCv<-* +C+ + C++Gk C+ + g+++C+ eg01330 1448 PCQAIKCKHGK-CRLS-GLGQPYCE 1470 SM00181: domain 9 of 9, from 1448 to 1481: score 25.3, E = 0.0086 *->eCa..pCsnGgtEqnGtCi.....sytC.CpgpGytg.rCe<-* +C+ C +G +C+ ++ + ++C+C Gytg++C eg01330 1448 PCQaiKCKHG------KCRlsglgQPYCeCS-SGYTGdSCD 1481 SM00041: domain 1 of 1, from 1492 to 1561: score 25.4, E = 0.00042 *->kspvrqtityngCssnqpvklafCeGkCgsasraedvmysieaqdvd ++ + y+ C+ ++v+ C G C eg01330 1492 RDYYQKQQGYAACQTTKKVSRLECRGGCA------------------ 1520 hsdCsCCqpektktrkVrLrCpdGstgvtktrvthiesCgCestkCp<-* + ++CC p+++k+rk + C+dGs+ ++ + v + +CgC+ C+ eg01330 1521 -G-GQCCGPLRSKRRKYSFECTDGSS-FVDE-VEKVVKCGCTR--CV 1561 //