hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-15173291/chunk_1/iprscan-20080808-15173291.nocrc
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Query sequence: eg01636
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
SM00191                                                 230.1    1.9e-64   5

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
SM00191         1/5     131   190 ..     1    56 []    34.6  1.4e-05
SM00191         2/5     298   348 ..     1    56 []    57.0  2.5e-12
SM00191         3/5     352   413 ..     1    56 []    43.0    4e-08
SM00191         4/5     416   472 ..     1    56 []    65.5  6.7e-15
SM00191         5/5     480   534 ..     1    56 []    30.1   0.0003

Alignments of top-scoring domains:
SM00191: domain 1 of 5, from 131 to 190: score 34.6, E = 1.4e-05
                   *->pgsyFGysvagvgDlngDksGypDlllvGAPr...........GaVY
                       gsyFG++v++ +       +++  llvGAP+ ++++++  ++G+V 
     eg01636   131    EGSYFGFAVDFFVPSAS---SRMF-LLVGAPKanttqpgivegGQVL 173  

                   vyfgssnsgggrciplqnls<-*
                   ++ +ss   ++rc+p+ ++    
     eg01636   174 KCDWSS---TRRCQPIEFDA    190  

SM00191: domain 2 of 5, from 298 to 348: score 57.0, E = 2.5e-12
                   *->pgsyFGysvagvgDlngDksGypDlllvGAPr.....GaVYvyfgss
                      ++sy+Gysva vgD+ngD  G++D ++ G Pr  ++ G VY+y    
     eg01636   298    DDSYLGYSVA-VGDFNGD--GIDD-FVSGVPRaartlGMVYIYD--- 337  

                   nsgggrciplqnls<-*
                      g ++++l n +   
     eg01636   338 ---GKNMSSLYNFT    348  

SM00191: domain 3 of 5, from 352 to 413: score 43.0, E = 4e-08
                   *->pgsyFGysvagvgDlngDksGypDlllvGAPr.............Ga
                      +++yFG+sva ++D+ngD   y D + +GAP+  +++++++ ++ G+
     eg01636   352    MAAYFGFSVA-ATDINGD--DYAD-VFIGAPLfmdrgsdgklqevGQ 394  

                   VYvyfgssnsgggrciplqnls<-*
                   V v  +++   +g+++     +   
     eg01636   395 VSVSLQRA---SGDFQTTKLNG    413  

SM00191: domain 4 of 5, from 416 to 472: score 65.5, E = 6.7e-15
                   *->pgsyFGysvagvgDlngDksGypDlllvGAPr......GaVYvyfgs
                       +++FG+++a++gDl++D  G++D +++ AP+++++++G VY+++g+
     eg01636   416    VFARFGSAIAPLGDLDQD--GFND-IAIAAPYggedkkGIVYIFNGR 459  

                   snsgggrciplqnls<-*
                   s   g++  p+q+l+   
     eg01636   460 ST--GLNAVPSQILE    472  

SM00191: domain 5 of 5, from 480 to 534: score 30.1, E = 0.0003
                   *->pgsyFGysvagvgDlngDksGypDlllvGAPr.......GaVYvyfg
                      +   FGys+ g++D++++  GypD l+vGA++ ++    +a +v+ +
     eg01636   480    MPPSFGYSMKGATDIDKN--GYPD-LIVGAFGvdrailyRARPVITV 523  

                   ssnsgggrciplqnls<-*
                        + +++  + ++   
     eg01636   524 -----NAGLEVYPSIL    534  

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