hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-05231108/chunk_1/iprscan-20090618-05231108.nocrc
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Query sequence: eg01734
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00481.12.ls Protein phosphatase 2C                         395.8     6e-116   1
PF00481.12.fs Protein phosphatase 2C                         393.9   2.2e-115   1
PF07830.3.fs Protein serine/threonine phosphatase 2C, C-t   189.6    8.1e-57   1
PF07830.3.ls Protein serine/threonine phosphatase 2C, C-t   191.5    1.9e-54   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00481.12.fs   1/1      37   299 ..     1   303 []   393.9 2.2e-115
PF00481.12.ls   1/1      37   299 ..     1   303 []   395.8   6e-116
PF07830.3.fs   1/1     300   379 ..     1    84 []   189.6  8.1e-57
PF07830.3.ls   1/1     300   379 ..     1    84 []   191.5  1.9e-54

Alignments of top-scoring domains:
PF00481.12.fs: domain 1 of 1, from 37 to 299: score 393.9, E = 2.2e-115
                   *->ldvgvsrmqgwrksmeDahialknlnssssgkdsisffavfDghgGs
                      l++g+s+mqgwr +meDah+a   l    sg +s+sffav+Dgh+Gs
     eg01734    37    LRYGLSSMQGWRVEMEDAHTAVIGLP---SGLESWSFFAVYDGHAGS 80   

                   qaakyagkhlekaltilaerksfpegnpnEwkl.....sdledalrksfl
                   q+aky+++hl    +++ ++++f+++      ++ ++ +++++++r +fl
     eg01734    81 QVAKYCCEHLL---DHITNNQDFKGS------AgapsvENVKNGIRTGFL 121  

                   eadtdeelrsaadsanhvltkedlssGsTAvvalirgqkklLyvANvGDS
                   e  +de++r   +s+   +++  ++sGsTAv +li++q+   y+ N+GDS
     eg01734   122 E--IDEHMRV--MSEK--KHG-ADRSGSTAVGVLISPQH--TYFINCGDS 162  

                   ravLcrngnaiklvtqLtedHkpsdedEkrRIeaaGGfvsrvsgngRvnG
                   r++Lcrn++++    + t+dHkps+++Ek+RI++aGG+v+     +RvnG
     eg01734   163 RGLLCRNRKVH----FFTQDHKPSNPLEKERIQNAGGSVM----IQRVNG 204  

                   vfLavSRAfGDfelKpnvtlgpelslerGifseeqpVsaePdvtsstkit
                   + LavSRA+GDf++K+ +++gp++          q+Vs+eP+v+  ++++
     eg01734   205 S-LAVSRALGDFDYKCVHGKGPTE----------QLVSPEPEVH-DIERS 242  

                   eskDeFliLAcDGlWDvvsdqeavdivrselsdgnksagspmeaaekLvd
                   e++D+F+iLAcDG+WDv+ ++e++d+vrs+l+ ++    +++++++++vd
     eg01734   243 EEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTD----DLEKVCNEVVD 288  

                   eAiargseDni<-*
                   +++ +gs+Dn+   
     eg01734   289 TCLYKGSRDNM    299  

PF00481.12.ls: domain 1 of 1, from 37 to 299: score 395.8, E = 6e-116
                   *->ldvgvsrmqgwrksmeDahialknlnssssgkdsisffavfDghgGs
                      l++g+s+mqgwr +meDah+a   l    sg +s+sffav+Dgh+Gs
     eg01734    37    LRYGLSSMQGWRVEMEDAHTAVIGLP---SGLESWSFFAVYDGHAGS 80   

                   qaakyagkhlekaltilaerksfpegnpnEwkl.....sdledalrksfl
                   q+aky+++hl    +++ ++++f+++      ++ ++ +++++++r +fl
     eg01734    81 QVAKYCCEHLL---DHITNNQDFKGS------AgapsvENVKNGIRTGFL 121  

                   eadtdeelrsaadsanhvltkedlssGsTAvvalirgqkklLyvANvGDS
                   e  +de++r   +s+   +++  ++sGsTAv +li++q+   y+ N+GDS
     eg01734   122 E--IDEHMRV--MSEK--KHG-ADRSGSTAVGVLISPQH--TYFINCGDS 162  

                   ravLcrngnaiklvtqLtedHkpsdedEkrRIeaaGGfvsrvsgngRvnG
                   r++Lcrn++++    + t+dHkps+++Ek+RI++aGG+v+     +RvnG
     eg01734   163 RGLLCRNRKVH----FFTQDHKPSNPLEKERIQNAGGSVM----IQRVNG 204  

                   vfLavSRAfGDfelKpnvtlgpelslerGifseeqpVsaePdvtsstkit
                   + LavSRA+GDf++K+ +++gp++          q+Vs+eP+v+  ++++
     eg01734   205 S-LAVSRALGDFDYKCVHGKGPTE----------QLVSPEPEVH-DIERS 242  

                   eskDeFliLAcDGlWDvvsdqeavdivrselsdgnksagspmeaaekLvd
                   e++D+F+iLAcDG+WDv+ ++e++d+vrs+l+ ++    +++++++++vd
     eg01734   243 EEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTD----DLEKVCNEVVD 288  

                   eAiargseDni<-*
                   +++ +gs+Dn+   
     eg01734   289 TCLYKGSRDNM    299  

PF07830.3.fs: domain 1 of 1, from 300 to 379: score 189.6, E = 8.1e-57
                   *->siIlIcFPGAPKVseEAvkrEeeLdqtleqrveEiIevikskeeipD
                      s+IlIcFP+APKVs+EAvk+E+eLd++le+rveEiI+  k++e++pD
     eg01734   300    SVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIK--KQGEGVPD 344  

                   lvtllktLaseaidIPdLPPGGGLqaKysvIeavfke<-*
                   lv++++tLase  +IP+LPPGG+L++K++vIeav+++   
     eg01734   345 LVHVMRTLASE--NIPSLPPGGELASKRNVIEAVYNR    379  

PF07830.3.ls: domain 1 of 1, from 300 to 379: score 191.5, E = 1.9e-54
                   *->siIlIcFPGAPKVseEAvkrEeeLdqtleqrveEiIevikskeeipD
                      s+IlIcFP+APKVs+EAvk+E+eLd++le+rveEiI+  k++e++pD
     eg01734   300    SVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIK--KQGEGVPD 344  

                   lvtllktLaseaidIPdLPPGGGLqaKysvIeavfke<-*
                   lv++++tLase  +IP+LPPGG+L++K++vIeav+++   
     eg01734   345 LVHVMRTLASE--NIPSLPPGGELASKRNVIEAVYNR    379  

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