hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-15310895/chunk_1/iprscan-20080808-15310895.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: eg01752 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF08926.1.ls Domain of unknown function (DUF1908) 725.5 3.4e-215 1 PF08926.1.fs Domain of unknown function (DUF1908) 723.6 1.3e-214 1 PF00069.15.ls Protein kinase domain 274.7 1.6e-79 1 PF00069.15.fs Protein kinase domain 272.8 6.1e-79 1 PF00595.14.fs PDZ domain (Also known as DHR or GLGF) 33.6 8.6e-09 1 PF07714.7.fs Protein tyrosine kinase 30.3 1e-08 1 PF00595.14.ls PDZ domain (Also known as DHR or GLGF) 32.8 1.1e-06 1 PF00433.14.fs Protein kinase C terminal domain 19.1 5.6e-05 1 PF00433.14.ls Protein kinase C terminal domain 21.1 0.0011 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF08926.1.fs 1/1 66 342 .. 1 317 [] 723.6 1.3e-214 PF08926.1.ls 1/1 66 342 .. 1 317 [] 725.5 3.4e-215 PF00069.15.ls 1/1 380 653 .. 1 287 [] 274.7 1.6e-79 PF00069.15.fs 1/1 380 653 .. 1 287 [] 272.8 6.1e-79 PF07714.7.fs 1/1 452 526 .. 81 161 .. 30.3 1e-08 PF00433.14.fs 1/1 671 717 .. 1 47 [] 19.1 5.6e-05 PF00433.14.ls 1/1 671 717 .. 1 47 [] 21.1 0.0011 PF00595.14.ls 1/1 883 969 .. 1 86 [] 32.8 1.1e-06 PF00595.14.fs 1/1 919 969 .. 33 86 .] 33.6 8.6e-09 Alignments of top-scoring domains: PF08926.1.fs: domain 1 of 1, from 66 to 342: score 723.6, E = 1.3e-214 *->sSpldSprnfststsanFsfarssslradraDgRRWSLASLPStSGY +Sp+dSprnfs+s+sa+Fsfar r+DgRRWSLASLPS SGY eg01752 66 NSPQDSPRNFSPSASAHFSFAR-------RTDGRRWSLASLPS-SGY 104 GTpgntpsStvSSssSSqErLhqmLpyqptsdelhflskhFrSteSvtde GT ntpsStvSSs+SSqE+Lhq Lpyqpt+delhflskhF++teS+++e eg01752 105 GT--NTPSSTVSSSCSSQEKLHQ-LPYQPTPDELHFLSKHFCTTESIATE 151 dghrspavqnaflnRPRSRSLtSPgrslsefdnEiVmmnhVYkERFPkAt +++r++++ RPRSRSL SPgrs++++d+Ei+mmnhVYkERFPkAt eg01752 152 NRCRNTPM------RPRSRSL-SPGRSPACCDHEIIMMNHVYKERFPKAT 194 aQMEerLkeiiteysPvmrsrrdtvLpaesyadrsllrlLADGvlgFihH aQMEerLkeiit+ysP d+vLp LADGvl+F+hH eg01752 195 AQMEERLKEIITSYSP------DNVLP------------LADGVLSFTHH 226 QivELArDCLdKSkdgLiTsrYFlELqekLEklLqeAyerseseevafis Qi+ELArDCLdKS++gLiTsrYFlELq+kL+klLqeA++rses+e+afi+ eg01752 227 QIIELARDCLDKSHQGLITSRYFLELQHKLDKLLQEAHDRSESGELAFIK 276 kLVkKlLiiisRPARLLECLEFDPeeFYhLLEaAEGvakegqGikTarvp +LV+K+Li+i+RPARLLECLEFDPeeFY+LLEaAEG+akegqGikT eg01752 277 QLVRKILIVIARPARLLECLEFDPEEFYYLLEAAEGHAKEGQGIKT---- 322 DiPrYIIsqLGLtrDPLeem<-* DiPrYIIsqLGL++DPLeem eg01752 323 DIPRYIISQLGLNKDPLEEM 342 PF08926.1.ls: domain 1 of 1, from 66 to 342: score 725.5, E = 3.4e-215 *->sSpldSprnfststsanFsfarssslradraDgRRWSLASLPStSGY +Sp+dSprnfs+s+sa+Fsfar r+DgRRWSLASLPS SGY eg01752 66 NSPQDSPRNFSPSASAHFSFAR-------RTDGRRWSLASLPS-SGY 104 GTpgntpsStvSSssSSqErLhqmLpyqptsdelhflskhFrSteSvtde GT ntpsStvSSs+SSqE+Lhq Lpyqpt+delhflskhF++teS+++e eg01752 105 GT--NTPSSTVSSSCSSQEKLHQ-LPYQPTPDELHFLSKHFCTTESIATE 151 dghrspavqnaflnRPRSRSLtSPgrslsefdnEiVmmnhVYkERFPkAt +++r++++ RPRSRSL SPgrs++++d+Ei+mmnhVYkERFPkAt eg01752 152 NRCRNTPM------RPRSRSL-SPGRSPACCDHEIIMMNHVYKERFPKAT 194 aQMEerLkeiiteysPvmrsrrdtvLpaesyadrsllrlLADGvlgFihH aQMEerLkeiit+ysP d+vLp LADGvl+F+hH eg01752 195 AQMEERLKEIITSYSP------DNVLP------------LADGVLSFTHH 226 QivELArDCLdKSkdgLiTsrYFlELqekLEklLqeAyerseseevafis Qi+ELArDCLdKS++gLiTsrYFlELq+kL+klLqeA++rses+e+afi+ eg01752 227 QIIELARDCLDKSHQGLITSRYFLELQHKLDKLLQEAHDRSESGELAFIK 276 kLVkKlLiiisRPARLLECLEFDPeeFYhLLEaAEGvakegqGikTarvp +LV+K+Li+i+RPARLLECLEFDPeeFY+LLEaAEG+akegqGikT eg01752 277 QLVRKILIVIARPARLLECLEFDPEEFYYLLEAAEGHAKEGQGIKT---- 322 DiPrYIIsqLGLtrDPLeem<-* DiPrYIIsqLGL++DPLeem eg01752 323 DIPRYIISQLGLNKDPLEEM 342 PF00069.15.ls: domain 1 of 1, from 380 to 653: score 274.7, E = 1.6e-79 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkr.kekskkdktar +e+++ + G++G Vy +hk +++++A+K+i+k++ + ++ ++a+ eg01752 380 FETIKLISNGAYGAVYFVRHKESRQRFAMKKINKQnLILRNQIQQAF 426 rlsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls E il p++v ++++fe+++hl++V+Ey+egG d ++++ eg01752 427 V--ERDILTFAENPFVVSMYCSFETRRHLCMVMEYVEGG----DCATLMK 470 etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng + gpl + d a++++ +++ +leYLH+ gi+HRDLKP+N+L+ + g eg01752 471 ---NMGPL--PVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLVTSMG 515 vvdaflKiaDFGlAkkls............t.sss.l..ttfvGTpwYmA ++ K++DFGl+k+ + +++ +++ ++ +++ ++ ++GTp+Y+A eg01752 516 HI----KLTDFGLSKVGLmsmttnlyeghiEkDAReFldKQVCGTPEYIA 561 PEvllggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirki PEv+l ++gyg++vD+W++G+ilye+l G PF g+ ++ +l+ ++ eg01752 562 PEVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGD-----TPEELFGQV 605 lgpplefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRlt... + e+++pe+d+ + +++a+dLi+ +L+++P +Rl++++ eg01752 606 IS--DEINWPEKDE----------APPPDAQDLITLLLRQNPLERLGtgg 643 aeeilqHPwf<-* a e++qH +f eg01752 644 AYEVKQHRFF 653 PF00069.15.fs: domain 1 of 1, from 380 to 653: score 272.8, E = 6.1e-79 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkr.kekskkdktar +e+++ + G++G Vy +hk +++++A+K+i+k++ + ++ ++a+ eg01752 380 FETIKLISNGAYGAVYFVRHKESRQRFAMKKINKQnLILRNQIQQAF 426 rlsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls E il p++v ++++fe+++hl++V+Ey+egG d ++++ eg01752 427 V--ERDILTFAENPFVVSMYCSFETRRHLCMVMEYVEGG----DCATLMK 470 etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng + gpl + d a++++ +++ +leYLH+ gi+HRDLKP+N+L+ + g eg01752 471 ---NMGPL--PVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLVTSMG 515 vvdaflKiaDFGlAkkls............t.sss.l..ttfvGTpwYmA ++ K++DFGl+k+ + +++ +++ ++ +++ ++ ++GTp+Y+A eg01752 516 HI----KLTDFGLSKVGLmsmttnlyeghiEkDAReFldKQVCGTPEYIA 561 PEvllggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirki PEv+l ++gyg++vD+W++G+ilye+l G PF g+ ++ +l+ ++ eg01752 562 PEVIL-RQGYGKPVDWWAMGIILYEFLVGCVPFFGD-----TPEELFGQV 605 lgpplefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRlt... + e+++pe+d+ + +++a+dLi+ +L+++P +Rl++++ eg01752 606 IS--DEINWPEKDE----------APPPDAQDLITLLLRQNPLERLGtgg 643 aeeilqHPwf<-* a e++qH +f eg01752 644 AYEVKQHRFF 653 PF07714.7.fs: domain 1 of 1, from 452 to 526: score 30.3, E = 1e-08 *->ggpglyiVtEymegGdLldfLrkhregrpLtlkdLlsfalQiAkGMe + l++V+Ey+egGd + +++ +pL++ + + ++ ++e eg01752 452 H---LCMVMEYVEGGDCATLMKNM---GPLPVDMARMYFAETVLALE 492 YLesknfvHRDLAARNcLVsenlvVKIsDFGLaR<-* YL++ ++vHRDL N LV++ +++K +DFGL++ eg01752 493 YLHNYGIVHRDLKPDNLLVTSMGHIKLTDFGLSK 526 PF00433.14.fs: domain 1 of 1, from 671 to 717: score 19.1, E = 5.6e-05 *->kvksptDTsNFDpeFTsepptltpppdsr.lssgkqleFrGFtYvnp +++s++DTs+FD+ +++++++t ++++ + + e r+F+ ++ eg01752 671 QLESEDDTSYFDTRSEKYHHMETE-EEDDtNDEDFNVEIRQFSSCSH 716 e<-* eg01752 717 R 717 PF00433.14.ls: domain 1 of 1, from 671 to 717: score 21.1, E = 0.0011 *->kvksptDTsNFDpeFTsepptltpppdsr.lssgkqleFrGFtYvnp +++s++DTs+FD+ +++++++t ++++ + + e r+F+ ++ eg01752 671 QLESEDDTSYFDTRSEKYHHMETE-EEDDtNDEDFNVEIRQFSSCSH 716 e<-* eg01752 717 R 717 PF00595.14.ls: domain 1 of 1, from 883 to 969: score 32.8, E = 1.1e-06 *->evtlekedkrgglGfsikggsdkga.....dkgifvsevlpGsgaAe + ++ ++ ++ Gf+i+ ++++ + +v +v +Gs+a + eg01752 883 QPIVIHS-SGKNYGFTIRAIRVYVGdsdiyTVHHIVWNVEEGSPACQ 928 agGrLqaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-* ag L+aGD I+ +NG+++ +l h e++++l +sg+ +v++t eg01752 929 AG--LKAGDLITHINGEPVHGLVHTEVIELLLKSGN-KVSITTT 969 PF00595.14.fs: domain 1 of 1, from 919 to 969: score 33.6, E = 8.6e-09 *->evlpGsgaAeagGrLqaGDqIlsvNGqdlenlsheeavlalkgsggs +v +Gs+a +ag L+aGD I+ +NG+++ +l h e++++l +sg+ eg01752 919 NVEEGSPACQAG--LKAGDLITHINGEPVHGLVHTEVIELLLKSGN- 962 evtLtvl<-* +v++t eg01752 963 KVSITTT 969 //