hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-16142635/chunk_1/iprscan-20080808-16142635.nocrc
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Query sequence: eh00630
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00209                                                 211.6    7.1e-59   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00209    1/6     635   687 ..     1    66 []    68.4  8.9e-16
SM00209    2/6     921   975 ..     1    66 []    22.0    0.037
SM00209    3/6     977  1035 ..     1    66 []    29.2  0.00057
SM00209    4/6    1038  1092 ..     1    66 []    33.5    3e-05
SM00209    5/6    1098  1159 ..     1    66 []    31.0  0.00017
SM00209    6/6    1170  1216 ..     1    66 []    27.6   0.0018

Alignments of top-scoring domains:
SM00209: domain 1 of 6, from 635 to 687: score 68.4, E = 8.9e-16
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      ws+Ws WS+CS +tCGgG     v+  +R      c++p+p  q gg
     eh00630   635    WSAWSKWSECS-RTCGGG-----VKFQER-----HCNNPKP--QYGG 668  

                   epCs....EtrpCntqpnLqpCp<-*
                     C+++++ ++ Cn +    pC    
     eh00630   669 LFCPgssrIYQLCNIN----PCN    687  

SM00209: domain 2 of 6, from 921 to 975: score 22.0, E = 0.037
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      ws     S+CS v+CGgG         +      c +  +   q++ 
     eh00630   921    WSIVQ--SECS-VSCGGG-----YINVKAI----CLRDQNT--QVNS 953  

                   epCs.......EtrpCntqpnLqpCp<-*
                   + Cs ++++ +E ++Cn       Cp   
     eh00630   954 SFCSaktkpvtEPKICNAF----SCP    975  

SM00209: domain 3 of 6, from 977 to 1035: score 29.2, E = 0.00057
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                       +  +eWS+CS + C gG      ++R+ +    c+   p   q+ +
     eh00630   977    YWMPGEWSTCS-KACAGG-----QQSRKIQ----CVQKKPF--QKEE 1011 

                   epCs.........EtrpCntqpnLqpCp<-*
                   +   +  + ++++++++Cn +    +Cp   
     eh00630  1012 AVLHslcpvstptQVQACNSH----ACP    1035 

SM00209: domain 4 of 6, from 1038 to 1092: score 33.5, E = 3e-05
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      ws  ++WS+CS +tCG+G     vr+R+      c+  ++     ++
     eh00630  1038    WS-LGPWSQCS-KTCGRG-----VRKREL----LCKGSAAET--LPE 1071 

                   epCs......EtrpCntqpnLqpCp<-*
                   ++C++ ++++ ++ C +      Cp   
     eh00630  1072 SQCTslprpeLQEGCVLG----RCP    1092 

SM00209: domain 5 of 6, from 1098 to 1159: score 31.0, E = 0.00017
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                       +  s+WS+CS +tCG G     vr+R+       c+  +    + g
     eh00630  1098    QWVASSWSECS-ATCGLG-----VRKREM-----KCREKG----FQG 1129 

                   epCs...............EtrpCntqpnLqpCp<-*
                   +  + ++++ ++ ++++ +  ++Cn +    +Cp   
     eh00630  1130 KLITfperrcrnikkpnldLEETCNRR----ACP    1159 

SM00209: domain 6 of 6, from 1170 to 1216: score 27.6, E = 0.0018
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      w +   W +C+ vtCGgG     v+tR+     +c+   +p      
     eh00630  1170    WYSLP-WQQCT-VTCGGG-----VQTRSV----HCVQQGRP-----S 1200 

                   epCs.EtrpCntqpnLqpCp<-*
                   ++C   ++p  ++    +C    
     eh00630  1201 SSCLlHQKPPVLR----ACN    1216 

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