hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-05422609/chunk_1/iprscan-20090618-05422609.nocrc
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Query sequence: eh00685
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00409                                                  47.5    1.7e-09   1
SM00408                                                  35.2    8.6e-06   1
SM00181                                                  31.3    0.00013   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00409    1/1     176   264 ..     1    58 []    47.5  1.7e-09
SM00408    1/1     182   253 ..     1    56 []    35.2  8.6e-06
SM00181    1/1     315   356 ..     1    32 []    31.3  0.00013

Alignments of top-scoring domains:
SM00409: domain 1 of 1, from 176 to 264: score 47.5, E = 1.7e-09
                   *->pp.vtvkeGesvtLtC.as......titWy.................
                       ++++  +G+ ++L+C+ s+  ++ +++W+++++  ++++++++ + 
     eh00685   176    MKsQESAAGSKLVLRCeTSseysslRFKWFkngnelnrknkpqniki 222  

                   ........LtI.nvtpeDsesgGtYtCaat..sgsasseqgttLtVl<-*
                   +++++++ L+I++++++Ds   G+Y C + ++ g++s+  ++++t+    
     eh00685   223 qkkpgkseLRInKASLADS---GEYMCKVIskLGNDSA--SANITIV    264  

SM00408: domain 1 of 1, from 182 to 253: score 35.2, E = 8.6e-06
                   *->leGqsVtLtCp.asgdpvpnItWlk.gkplp..............sg
                        G  ++L+C++ s +    ++W+k+g +l++++++++ + ++++++
     eh00685   182    AAGSKLVLRCEtSSEYSSLRFKWFKnGNELNrknkpqnikiqkkpGK 228  

                   stLtiknvsleDsGlYtCvArNsvg<-*
                   s+L+i  +sl+DsG+Y C++ ++ g   
     eh00685   229 SELRINKASLADSGEYMCKVISKLG    253  

SM00181: domain 1 of 1, from 315 to 356: score 31.3, E = 0.00013
                   *->eCa.....pCsnGgtEqnGtCi.........sytC.CpgpGytg.rC
                       Ca+++++ C nG     G+C   ++ ++++ y C+C+ pG+tg rC
     eh00685   315    KCAekektFCVNG-----GECFmvkdlsnpsRYLCkCQ-PGFTGaRC 355  

                   e<-*
                       
     eh00685   356 T    356  

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