hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-16564978/chunk_1/iprscan-20080808-16564978.nocrc
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Query sequence: eh00686
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00194                                                 364.9   5.1e-105   1
SM00295                                                 232.9    2.8e-65   1
SM00404                                                 143.3    2.6e-38   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00295    1/1      46   249 ..     1   232 []   232.9  2.8e-65
SM00194    1/1     937  1211 ..     1   308 []   364.9 5.1e-105
SM00404    1/1    1097  1208 ..     1    92 []   143.3  2.6e-38

Alignments of top-scoring domains:
SM00295: domain 1 of 1, from 46 to 249: score 232.9, E = 2.8e-65
                   *->spkprvlkVylldgttlefevdssttaeelletvcrklglspresey
                      s+ ++v +++lld+ ++e+++  ++t++e le+v+++l+l  re++y
     eh00686    46    SKNCFVTRIRLLDSNVIECTLSVESTGQECLEAVAQRLEL--RETHY 90   

                   FgLqfedkdedshWldpaktilkqdvkspksepltlyFRvkFyppdwhgp
                   FgL+f +k ++ +W +++k+++k+  k    +++ l+F v Fy+p+    
     eh00686    91 FGLWFLSKSQQARWVELEKPLKKHLDK--FANEPLLFFGVMFYVPN---- 134  

                   peqlkeDptrynllylQvrddilsGrlpcpseeeallLAaLalqaefGdy
                   +++l++++try ++ylQv++d+l+Grl c+  +  ++LA La+qa+fGdy
     eh00686   135 VSWLQQEATRY-QYYLQVKKDVLEGRLRCT-LDQVIRLAGLAVQADFGDY 182  

                   dpeeeekkkslkhvakelslkrflPkqlldsikasflqiqltlkewrerI
                   ++          + + +l+++ ++P +l+ ++++        l+e+++++
     eh00686   183 NQF---------DSQDFLREYVLFPMDLALEEAV--------LEELTQKV 215  

                   velhkehaglspeeaklkYLelarrLpptYGvelF<-*
                   +++hk h+g  p+ea+l+Y++ ++rL+ ++G e F   
     eh00686   216 AQEHKAHSGILPAEAELMYINEVERLD-GFGQEIF    249  

SM00194: domain 1 of 1, from 937 to 1211: score 364.9, E = 5.1e-105
                   *->gleeEferlqrltpddllsnfltdesctvanlpeNreseKNRYkcdi
                      ++++E+e +++ + +           +++a+lpeN+  e+ R +  +
     eh00686   937    MVFTEYEQIPKKKANG---------IFSTAALPENA--ERSRIR-EV 971  

                   lpyDhtRVkLkppdgesdseegsDYINAnyidgy..kepkayIaTQGPLp
                   +py+++RV L p+++     ++++YINA++i++  ++ +  yIaTQGPLp
     eh00686   972 VPYEENRVELIPTKE-----NNTGYINASHIKVVvgGAEWHYIATQGPLP 1016 

                   sTveDFWrMVweqkvpvIVMLtnlvEkkterrkeggreKCaqYWPee...
                   +T+ DFW+MVweq+v vI+M t ++E+        gr K ++YWP  +++
     eh00686  1017 HTCHDFWQMVWEQGVNVIAMVTAEEEG--------GRTKSHRYWPKLgsk 1058 

                   ..sltyGditVtlvseeklpddytiRtlevtntgtekkdlkaksetrtVt
                   ++s tyG+++Vt++  +    +y ++ l+v++           +++rtV+
     eh00686  1059 hsSATYGKFKVTTKFRTDSV-CYATTGLKVKHLLS--------GQERTVW 1099 

                   hyhytnWPDhgvPespkslldfvrlvrksqssspnsse.nivssnskyag
                   h++yt+WPDhg+Pe+ +++l++++++ +++++ + + e+           
     eh00686  1100 HLQYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLEgT---------- 1139 

                   tspsgPivVHCSAGvGRTGTFiaidillqqlea...vdifdiVkelRsqR
                   + +++PivVHCSAGvGRTG++i+ + ++ +le++++v ++ +++ lR+qR
     eh00686  1140 KNRHPPIVVHCSAGVGRTGVLILSELMIYCLEHnekVEVPMMLRLLREQR 1189 

                   pgmVQTeeQYiFlyraileylk<-*
                   ++m+QT +QY+F+y++++++l+   
     eh00686  1190 MFMIQTIAQYKFVYQVLIQFLQ    1211 

SM00404: domain 1 of 1, from 1097 to 1208: score 143.3, E = 2.6e-38
                   *->tvkhyhytgWpDhvekdsgvPe..dsileflravrk...........
                      tv+h++yt+WpDh     g+Pe+ +++l++l+++++ ++++++  ++
     eh00686  1097    TVWHLQYTDWPDH-----GCPEdvQGFLSYLEEIQSvrrhtnsmleg 1138 

                   ......PivVHCSAGvGRTGtfvaidillqq......vdifdtvkelRsq
                   ++++++PivVHCSAGvGRTG++++ ++++ + +++++v + ++++ lR+q
     eh00686  1139 tknrhpPIVVHCSAGVGRTGVLILSELMIYClehnekVEVPMMLRLLREQ 1188 

                   RpgmvqteeQYlFlyralle<-*
                   R++m+qt +QY+F+y++l++   
     eh00686  1189 RMFMIQTIAQYKFVYQVLIQ    1208 

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