hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-17100201/chunk_1/iprscan-20080808-17100201.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: eh00712 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR00502 nagB: glucosamine-6-phosphate isomerase 519.6 1.2e-153 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR00502 1/1 36 293 .. 1 260 [] 519.6 1.2e-153 Alignments of top-scoring domains: TIGR00502: domain 1 of 1, from 36 to 293: score 519.6, E = 1.2e-153 *->MrliilqTyEelskwAArhianrIneFKPtaarPFVLGLpTGgTPvg Mrl il y s wAA+ i nrI FKP +r F LGLpTG+TP+g eh00712 36 MRLVILDNYDLASEWAAKYICNRIIQFKPGQDRYFTLGLPTGSTPLG 82 tYkqLIrlyqagkiSFqnVvTFNlDEYvGLseeHPeSYhsFMhnnFFqHI Yk LI+ +++g +SF+ V TFN+DEYvGL+ +HPeSYhs+M+nnFF HI eh00712 83 CYKKLIEYHKNGHLSFKYVKTFNMDEYVGLPRNHPESYHSYMWNNFFKHI 132 DikpenInIlNGNaddleAECrrYEekIkSyGgIdlflgGIGadGHIaFN Di p n +Il GNa dl AEC E kIk +GgIdlf+gGIG+dGHIaFN eh00712 133 DIDPNNAHILDGNAADLQAECDAFENKIKEAGGIDLFVGGIGPDGHIAFN 182 EPGSSleSRTRikTLtedTiiANsRFFegDvnqVPKyALTvGIgTiLdFS EPGSSl SRTR kTL dTi AN+ +F+gD +VP ALTvG+gT++d + eh00712 183 EPGSSLVSRTRLKTLAMDTILANAKYFDGDLSKVPTMALTVGVGTVMD-A 231 kevllLvsGhqKAeAvqkavEGnvnhdwtiSaLQlHkhvivvcDeeAaqe ev++L++G KA A+ ka+E +vnh+wt+Sa Q H+ i vcDe A+ e eh00712 232 REVMILITGAHKAFALYKAIEEGVNHMWTVSAFQQHPRTIFVCDEDATLE 281 LKvkTveYFnelE<-* L vkTv+YF E eh00712 282 LRVKTVKYFKG-E 293 //