hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-17410965/chunk_1/iprscan-20080808-17410965.nocrc
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Query sequence: eh00752
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00312                                                 107.9    1.1e-27   1
SM00155                                                  72.7    4.6e-17   2
SM00233                                                  44.4    1.5e-08   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00312     1/1     102   232 ..     1   142 []   107.9  1.1e-27
SM00233     1/1     243   353 ..     1    82 []    44.4  1.5e-08
SM00155     1/2     482   509 ..     1    30 []    35.2    9e-06
SM00155     2/2     876   903 ..     1    30 []    37.5  1.8e-06

Alignments of top-scoring domains:
SM00312: domain 1 of 1, from 102 to 232: score 107.9, E = 1.1e-27
                   *->dniai.vavveeetsgkkrgdgkhyyyvieietstnedveewtvyRR
                      ++i+ +v +ve++ts   +   ++++y+ie++++ +    +w+v+R+
     eh00752   102    CPIKAqVLEVERFTS--TTRVPSINLYTIELTHGEF----KWQVKRK 142  

                   YsdFleLhskLlkkfpqekrrriiPplPekkllgryrerae.k.e.smkv
                   +++F+e+h+ Llk+      +++iP ++++++++r+++r+e+++++s  +
     eh00752   143 FKHFQEFHRELLKYKA----FIRIPIPTRRHTFRRQNVREEpReMpS--L 186  

                   kk.slnnfseefiekRrrgLerYLqkllnhPelinhyrvsevvleFLess
                   +++s+n+  ee++  Rr++Le+YL+k+l+ P+++n    ++ ++eFL+ s
     eh00752   187 PRsSENMIREEQFLGRRKQLEDYLTKILKMPMYRN----YHATTEFLDIS 232  

                   <-*
                      
     eh00752     -     -    

SM00233: domain 1 of 1, from 243 to 353: score 44.4, E = 1.5e-08
                   *->vikeGwLlkks................k.swkkryfvLfngvLlyyk
                        +eG ++k+s++++ ++ +  ++++ + +w kr++++++++Lly k
     eh00752   243    KGIEGMIMKRSgghripglnccgqgraCyRWSKRWLIVKDSFLLYMK 289  

                   sk.kpkgsipLsgcsvre.p.........cFeivt.drtlllqAeseeer
                   +++  + ++ L + +++ ++++++ + + +++i + +rtl+l+++s  ++
     eh00752   290 PDsGAIAFVLLVDKEFKIkVgkketetkyGIRIDNlSRTLILKCNSYRHA 339  

                   eeWvealqsaiaka<-*
                   + W  a+++ i+k+   
     eh00752   340 RWWGGAIEEFIQKH    353  

SM00155: domain 1 of 2, from 482 to 509: score 35.2, E = 9e-06
                   *->ydgvlHtKlmivDderkiafiGsaNldgrs<-*
                      y++++H+Kl+i+D+   +af+G+++l +++   
     eh00752   482    YLWAHHEKLVIIDQS--VAFVGGIDLAYGR    509  

SM00155: domain 2 of 2, from 876 to 903: score 37.5, E = 1.8e-06
                   *->ydgvlHtKlmivDderkiafiGsaNldgrs<-*
                       ++++H+Kl+i Dd   +++iGsaN+++rs   
     eh00752   876    ELIYVHSKLLIADDN--TVIIGSANINDRS    903  

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