hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-17533422/chunk_1/iprscan-20080808-17533422.nocrc
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Query sequence: ej00427
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00061                                                  66.5    3.4e-15   1
SM00184                                                  44.8    1.1e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00184    1/1      99   137 ..     1    23 []    44.8  1.1e-08
SM00061    1/1     384   511 ..     1   123 []    66.5  3.4e-15

Alignments of top-scoring domains:
SM00184: domain 1 of 1, from 99 to 137: score 44.8, E = 1.1e-08
                   *->CpICle....pvvlpCgH.FCr.Ci..........CPlC<-*
                      CpICl   +++v +pCgH+FC+ Ci ++ ++ +++CP+    
     ej00427    99    CPICLMalreAVQTPCGHrFCKaCIiksirdaghkCPVD    137  

SM00061: domain 1 of 1, from 384 to 511: score 66.5, E = 3.4e-15
                   *->vlshtfknvSkfKLa.teegesyfSpseeh.kggfnipWrlkikrkG
                      +++ +f +  k+  +++e+   ++Sp ++ +k+g++++ rl+++   
     ej00427   384    WKIGNFGMHLKC--QeEEKPVVIHSPGFYTgKPGYKLCMRLHLQLPT 428  

                   ..gkngflglyLhCekeeceerlevkWsieaeftlkLvsqnGkslrsvir
                    +++ ++++l+ h +++e+++ l  +W+++    l++++q++  +    r
     ej00427   429 aqRCANYISLFVHTMQGEYDSHL--PWPFQGTIRLTILDQSEAPV----R 472  

                   .h.v.kfaskkdthvFe......kpsgwGfskFisWddL<-*
                   +++++++  k     F++++ +++p+g+G+  F+ ++ L   
     ej00427   473 qNhEeIMDAKPELLAFQrptiprNPKGFGYVTFMHLEAL    511  

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