hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-05560135/chunk_1/iprscan-20090618-05560135.nocrc
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Query sequence: ej00442
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00353                                                  79.8    3.3e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00353    1/1     197   249 ..     1    61 []    79.8  3.3e-19

Alignments of top-scoring domains:
SM00353: domain 1 of 1, from 197 to 249: score 79.8, E = 3.3e-19
                   *->narERrlrRRekiNeqafdeLrslvPtlpkgggnskKlsKasiLrlA
                      n rER  +R +++N  af+eLr+l+Pt+p    ++kKlsK +iLrlA
     ej00442   197    NSRER--WRQQNVNG-AFAELRKLIPTHP----PDKKLSKNEILRLA 236  

                   ieYIrksLqeqlqe<-*
                   ++YI  +L ++l +   
     ej00442   237 MKYI-NFLAKLLND    249  

//