hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-06080129/chunk_1/iprscan-20090618-06080129.nocrc
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Query sequence: ej00479
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00640.13.ls Phosphotyrosine interaction domain (PTB/PID)   368.3   1.1e-107   2
PF00640.13.fs Phosphotyrosine interaction domain (PTB/PID)   364.6   5.7e-107   2
PF00397.16.fs WW domain                                       42.5    6.1e-11   1
PF00397.16.ls WW domain                                       44.5    3.3e-10   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00397.16.fs   1/1     294   322 ..     1    30 []    42.5  6.1e-11
PF00397.16.ls   1/1     294   322 ..     1    30 []    44.5  3.3e-10
PF00640.13.fs   1/2     421   557 ..     1   165 []   187.9  5.4e-55
PF00640.13.ls   1/2     421   557 ..     1   165 []   189.8  6.3e-54
PF00640.13.ls   2/2     592   714 ..     1   165 []   178.5  1.5e-50
PF00640.13.fs   2/2     592   714 ..     1   165 []   176.7    1e-51

Alignments of top-scoring domains:
PF00397.16.fs: domain 1 of 1, from 294 to 322: score 42.5, E = 6.1e-11
                   *->lppgWeertdpdGrpYYyNhnTktTqWekP<-*
                      lppgW+++ d  G +YY++  T+tTqWe+P   
     ej00479   294    LPPGWKRVSDIAG-TYYWHIPTGTTQWERP    322  

PF00397.16.ls: domain 1 of 1, from 294 to 322: score 44.5, E = 3.3e-10
                   *->lppgWeertdpdGrpYYyNhnTktTqWekP<-*
                      lppgW+++ d  G +YY++  T+tTqWe+P   
     ej00479   294    LPPGWKRVSDIAG-TYYWHIPTGTTQWERP    322  

PF00640.13.fs: domain 1 of 2, from 421 to 557: score 187.9, E = 5.4e-55
                   *->FevkYLGsveVpeemrapdkntRmdvaneAisrvkmavpgKkpkakk
                      F+v++LG+ve++ee++ap+k+  ++++n++i++++++          
     ej00479   421    FAVRSLGWVEMAEEDLAPGKS--SVAVNNCIRQLSYC---------- 455  

                   ikrikgsrgerqpgtkidLsistdglklldekteaekevlhdhplrkISF
                   +++i+++ g +++g++++L ++ d+l+l+d+++   ++vlh +p+++I++
     ej00479   456 KNDIRDTVGIWGEGKDMYLILENDMLSLVDPMD---RSVLHSQPIVSIRV 502  

                   iavggDpdVdlrtFayarrsqdiiaadgatgkfaCHvFecekgkqlAedi
                   ++vg+D+    r+Fay       +a+d++t++++CHvF+c+    +A++i
     ej00479   503 WGVGRDNG---RDFAY-------VARDKDTRILKCHVFRCDT---PAKAI 539  

                   aqavGqAFevaYqeflra<-*
                   a+++++++++++ e+++a   
     ej00479   540 ATSLHEICSKIMAERKNA    557  

PF00640.13.ls: domain 1 of 2, from 421 to 557: score 189.8, E = 6.3e-54
                   *->FevkYLGsveVpeemrapdkntRmdvaneAisrvkmavpgKkpkakk
                      F+v++LG+ve++ee++ap+k+  ++++n++i++++++          
     ej00479   421    FAVRSLGWVEMAEEDLAPGKS--SVAVNNCIRQLSYC---------- 455  

                   ikrikgsrgerqpgtkidLsistdglklldekteaekevlhdhplrkISF
                   +++i+++ g +++g++++L ++ d+l+l+d+++   ++vlh +p+++I++
     ej00479   456 KNDIRDTVGIWGEGKDMYLILENDMLSLVDPMD---RSVLHSQPIVSIRV 502  

                   iavggDpdVdlrtFayarrsqdiiaadgatgkfaCHvFecekgkqlAedi
                   ++vg+D+    r+Fay       +a+d++t++++CHvF+c+    +A++i
     ej00479   503 WGVGRDNG---RDFAY-------VARDKDTRILKCHVFRCDT---PAKAI 539  

                   aqavGqAFevaYqeflra<-*
                   a+++++++++++ e+++a   
     ej00479   540 ATSLHEICSKIMAERKNA    557  

PF00640.13.ls: domain 2 of 2, from 592 to 714: score 178.5, E = 1.5e-50
                   *->FevkYLGsveVpeemrapdkntRmdvaneAisrvkmavpgKkpkakk
                      F+v+YLG+++V+++       ++md++n Ai++++ +          
     ej00479   592    FHVQYLGMLPVDKP-------VGMDILNSAIENLMTS---------- 621  

                   ikrikgsrgerqpgtkidLsistdglklldekteaekevlhdhplrkISF
                           ++++++ ++ +++++++++++ ek+  e+evl+++++r++SF
     ej00479   622 --------SNKEDWLSVNMNVADATVTVISEKN--EEEVLVECRVRFLSF 661  

                   iavggDpdVdlrtFayarrsqdiiaadgatgkfaCHvFecekgkqlAedi
                   ++vg+D++    tFa+        ++d + ++f CHvF+ce+   +A+++
     ej00479   662 MGVGKDVH----TFAF--------IMDTGNQRFECHVFWCEP---NAGNV 696  

                   aqavGqAFevaYqeflra<-*
                   ++av++A++++Yq++l+a   
     ej00479   697 SEAVQAACMLRYQKCLVA    714  

PF00640.13.fs: domain 2 of 2, from 592 to 714: score 176.7, E = 1e-51
                   *->FevkYLGsveVpeemrapdkntRmdvaneAisrvkmavpgKkpkakk
                      F+v+YLG+++V+++       ++md++n Ai++++ +          
     ej00479   592    FHVQYLGMLPVDKP-------VGMDILNSAIENLMTS---------- 621  

                   ikrikgsrgerqpgtkidLsistdglklldekteaekevlhdhplrkISF
                           ++++++ ++ +++++++++++ ek+  e+evl+++++r++SF
     ej00479   622 --------SNKEDWLSVNMNVADATVTVISEKN--EEEVLVECRVRFLSF 661  

                   iavggDpdVdlrtFayarrsqdiiaadgatgkfaCHvFecekgkqlAedi
                   ++vg+D++    tFa+        ++d + ++f CHvF+ce+   +A+++
     ej00479   662 MGVGKDVH----TFAF--------IMDTGNQRFECHVFWCEP---NAGNV 696  

                   aqavGqAFevaYqeflra<-*
                   ++av++A++++Yq++l+a   
     ej00479   697 SEAVQAACMLRYQKCLVA    714  

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