hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-18412410/chunk_1/iprscan-20080808-18412410.nocrc
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Query sequence: ej00480
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00337                                                 140.9    1.4e-37   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00337    1/1     230   329 ..     1   120 []   140.9  1.4e-37

Alignments of top-scoring domains:
SM00337: domain 1 of 1, from 230 to 329: score 140.9, E = 1.4e-37
                   *->LrrvgdelenkryerafssfsaqlhvsvatpetaielfteVatelfe
                      Lrrvgd+++ +++e+af+ ++++l++   ++e++++++ +V+ ++f+
     ej00480   230    LRRVGDGVQ-RNHETAFQGMLRKLDI---KNEDDVKSLSRVMIHVFS 272  

                   dGqPCniNWGRvVallsFggaLalklvnsqikeledlvsrlasfrvesll
                   dG   ++NWGR+V+l+sFg+++a++l+     ++e ++++la+      +
     ej00480   273 DG---VTNWGRIVTLISFGAFVAKHLKT---INQESCIEPLAES-----I 311  

                   veflketlgeRfpaeWlrenGGW<-*
                   ++ l +t      ++Wl +++GW   
     ej00480   312 TDVLVRTK-----RDWLVKQRGW    329  

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