hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-18471472/chunk_1/iprscan-20080808-18471472.nocrc
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Query sequence: ej00491
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00149                                                 271.0    9.5e-77   1
SM00148                                                 264.7    7.4e-75   1
SM00239                                                  61.7    9.1e-14   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00148    1/1     352   503 ..     1   182 []   264.7  7.4e-75
SM00149    1/1     625   741 ..     1   119 []   271.0  9.5e-77
SM00239    1/1     762   860 ..     1    92 []    61.7  9.1e-14

Alignments of top-scoring domains:
SM00148: domain 1 of 1, from 352 to 503: score 264.7, E = 7.4e-75
                   *->qDmdkPLshYfInsSHNsGtfkidiFPFGLDAPEKLRLPPYVTFLLR
                       Dm++PLs+YfInsSHN                              
     ej00491   352    TDMTQPLSAYFINSSHN------------------------------ 368  

                   FTYLtgkQlwgessvegYiqaLkaGcRcvELDcwdg..pdgePviyHGhT
                    TYLt  Ql+g+ssve+Y+qaL  GcRcvELD+w g++p +eP i+HG+T
     ej00491   369 -TYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGrpPEEEPFITHGFT 417  

                   ftskikLsdVleaIKkfAFvtSpyPEFvIlSLenHc.spdqQakmaqmfk
                   +t++++L+dVleaI++ AF+tSpyP  vIlS+enH++s  qQakma++++
     ej00491   418 MTTEVPLRDVLEAIAETAFKTSPYP--VILSFENHVdSAKQQAKMAEYCR 465  

                   eiFgdlLytkPltsseeypgsnLPsPeqLkgKILLkgK<-*
                   +iFgd L+++Pl+     pg  LPsP++L+g+IL+k+K   
     ej00491   466 SIFGDALLIEPLDKYPLAPGVPLPSPQDLMGRILVKNK    503  

SM00149: domain 1 of 1, from 625 to 741: score 271.0, E = 9.5e-77
                   *->lseLvsycapvkFrsfelaeekdnafyemsSfsEtkaakkllekapt
                      +s+Lv+y+ pvkF+sfe a+++ n + emsSf+Etk a+ +l+k+p+
     ej00491   625    MSTLVNYIEPVKFKSFEAARKR-NKCFEMSSFVETK-AMEQLTKSPM 669  

                   dfvryNqrqLsRvYPkGtRvDSSNYnPqvfWnaGcQMVALNfQTpDkaMq
                   +fv+yN++qLsR+YPkGtRvDSSNY+Pq fWn+GcQ+VALNfQT D+aMq
     ej00491   670 EFVEYNKQQLSRIYPKGTRVDSSNYMPQLFWNVGCQLVALNFQTLDVAMQ 719  

                   lNqGmFraNGgCGYVLKPefLR<-*
                   lN+G+F++NG++GY+LKPef+R   
     ej00491   720 LNAGVFEYNGRSGYLLKPEFMR    741  

SM00239: domain 1 of 1, from 762 to 860: score 61.7, E = 9.1e-14
                   *->tLtvkiisArnLp....DPYVkvs............kTkvvkktlsg
                       L+vk+is++ L +++   YV+v   + + +++++ +T++ +++   
     ej00491   762    ALRVKVISGQFLSdrkvGIYVEVDmfglpvdtrrkyRTRTSQGNS-- 806  

                   fNPvWnEesetFeFevpp....s.LeieVyDk..dfiGrvtippnnahqh
                   fNPvW+Ee   F+F+ +  ++ ++L+i  ++++++f+G+ ++p       
     ej00491   807 FNPVWDEE--PFDFPKVVlptlAsLRIAAFEEggKFVGHRILP------- 847  

                   sadglihlsell.ggrh.kl<-*
                          +s +++g+++  l   
     ej00491   848 -------VSAIRsGYHYvCL    860  

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