hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-19133172/chunk_1/iprscan-20080808-19133172.nocrc
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Query sequence: ej00565
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00210                                                 258.6      5e-73   1
SM00209                                                 204.3    1.1e-56   3
SM00214                                                  82.8    4.1e-20   1
SM00181                                                  55.6    6.4e-12   3
SM00179                                                  41.0    1.6e-07   2

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00210    1/1      79   276 ..     1   218 []   258.6    5e-73
SM00214    1/1     373   427 ..     1    75 []    82.8  4.1e-20
SM00209    1/3     437   484 ..     1    66 []    51.8  8.9e-11
SM00209    2/3     493   545 ..     1    66 []    76.2  4.1e-18
SM00209    3/3     550   602 ..     1    66 []    76.3  3.8e-18
SM00179    1/2     597   642 ..     1    34 []    11.3    0.066
SM00181    1/3     605   642 ..     1    32 []    22.6    0.054
SM00179    2/2     643   700 ..     1    34 []    29.6  0.00036
SM00181    2/3     646   700 ..     1    32 []    11.2       26
SM00181    3/3     704   745 ..     1    32 []    21.8    0.095

Alignments of top-scoring domains:
SM00210: domain 1 of 1, from 79 to 276: score 258.6, E = 5e-73
                   *->gfdllqvldLpessfgvrkvvglhatirvrGsdpsspAYrfgdidri
                      + ++++v+d++e++ ++rk++g++   +v+G+dpsspA+r++d+++i
     ej00565    79    SGGDNSVFDIFELTGAARKGSGRR---LVKGPDPSSPAFRIEDANLI 122  

                   pavvsqptrklfPasglpedFsllttfrqkpeTpksrgvLfaiydaqqnv
                   p+v+++++++l++a++ +++F ll+++rq++   k+rg+L+a+++++++ 
     ej00565   123 PPVPDDKFQDLVDAVRAEKGFLLLASLRQMK---KTRGTLLALERKDHSG 169  

                   rqlglevneVrDGrantlllryqkgsdGkvhtvaFrgEllpLaDgqWHkl
                   +++++++n    G+a tl+l+   +++Gk+h+v++++  + La+gqW+ +
     ej00565   170 QVFSVVSN----GKAGTLDLSL--TVQGKQHVVSVEE--ALLATGQWKSI 211  

                   aLsVsgssRGapavtLyVDCnkidsrpdldrpdqg.lppidtdGievlga
                   +L+V++++     ++Ly+DC+k+++ + ld p+q+ +++++ ++ ++++a
     ej00565   212 TLFVQEDR-----AQLYIDCEKMENAE-LDVPIQSvFTRDLASIARLRIA 255  

                   qaaqdekkfqgdlQqlkivcdp<-*
                   ++ + +++fqg+lQ++++v+++   
     ej00565   256 KGGV-NDNFQGVLQNVRFVFGT    276  

SM00214: domain 1 of 1, from 373 to 427: score 82.8, E = 4.1e-20
                   *->CvhpnGevyrdgetWkpdkpCqiCtCldgekvlCdkveCppppslpc
                      C+h nG++yr++e+W++d +C++C+C+++ ++ C+kv+Cp +p    
     ej00565   373    CYH-NGVQYRNNEEWTVD-SCTECHCQNS-VTICKKVSCPIMP---- 412  

                   kdsdCpnperlpavaekppGeCCpeyrC<-*
                       C+n+        +p+GeCCp  rC   
     ej00565   413 ----CSNA-------TVPDGECCP--RC    427  

SM00209: domain 1 of 3, from 437 to 484: score 51.8, E = 8.9e-11
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      ws+WseW++CS  +CG G     +++R R      c+  +       
     ej00565   437    WSPWSEWTSCS-TSCGNG-----IQQRGR-----SCDSLN------- 465  

                   epCs....EtrpCntqpnLqpCp<-*
                    +C++++ +tr+C  q    +C+   
     ej00565   466 NRCEgssvQTRTCHIQ----ECD    484  

SM00209: domain 2 of 3, from 493 to 545: score 76.2, E = 4.1e-18
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      ws Ws+WS+CS vtCG G     v tR R      c+ p+p++  +g
     ej00565   493    WSHWSPWSSCS-VTCGDG-----VITRIR-----LCNSPSPQM--NG 526  

                   epCs....EtrpCntqpnLqpCp<-*
                   +pC+++ +Et++C  +    +Cp   
     ej00565   527 KPCEgearETKACKKD----ACP    545  

SM00209: domain 3 of 3, from 550 to 602: score 76.3, E = 3.8e-18
                   *->wseWseWSpCSgvtCGgGgrtegvrtRtRsslrvccspppprnqngg
                      w++Ws+W  CS vtCGgG     v++R+R     c++p p   q+gg
     ej00565   550    WGPWSPWDICS-VTCGGG-----VQKRSR----LCNNPTP---QFGG 583  

                   epCs....EtrpCntqpnLqpCp<-*
                   ++C ++ +E ++Cn q    +Cp   
     ej00565   584 KDCVgdvtENQICNKQ----DCP    602  

SM00179: domain 1 of 2, from 597 to 642: score 11.3, E = 0.066
                   *->DiDEC........pCqnGGptgtCiN..vGSYrC..CppGyt...rn
                      +  +C+ ++  ++pC  G    +C+  ++GS +C+ CppGy++++ +
     ej00565   597    NKQDCpidgclsnPCFAGV---KCTSypDGSWKCgaCPPGYSgngIQ 640  

                   Ce<-*
                   C+   
     ej00565   641 CT    642  

SM00181: domain 1 of 3, from 605 to 642: score 22.6, E = 0.054
                   *->eCa..pCsnGgtEqnGtCi.....sytC..CpgpGytg...rCe<-*
                       C+++pC  G      +C++ +++s++C+ Cp pGy+g++ +C    
     ej00565   605    GCLsnPCFAGV-----KCTsypdgSWKCgaCP-PGYSGngiQCT    642  

SM00179: domain 2 of 2, from 643 to 700: score 29.6, E = 0.00036
                   *->DiDEC.....pCqnGGptgtCiN.vGSYrC..CppGyt.........
                      D+DEC++ ++ C n+ +  +C+N++ +Y C +Cpp +t++++ +++ 
     ej00565   643    DVDECkevpdACFNHNGEHRCENtDPGYNClpCPPRFTgsqpfgqgv 689  

                   .......rnCe<-*
                    + + +++ C+   
     ej00565   690 ehatankQVCK    700  

SM00181: domain 2 of 3, from 646 to 700: score 11.2, E = 26
                   *->eCa....pCsnGgtEqnGtCi....sytC..CpgpGytg........
                      eC + ++ C n+ +E   +C +++++y C +Cp p +tg+++ +++ 
     ej00565   646    ECKevpdACFNHNGE--HRCEntdpGYNClpCP-PRFTGsqpfgqgv 689  

                   ........rCe<-*
                   ++ + +++ C+   
     ej00565   690 ehatankqVCK    700  

SM00181: domain 3 of 3, from 704 to 745: score 21.8, E = 0.095
                   *->eCa....pCsnGgtEqnGtCi........sytC.CpgpGytg...rC
                      +C +++++C  +     ++C   ++ +++ y+C+C+ pGy g++  C
     ej00565   704    PCTdgthDCNKN-----AKCNylghysdpMYRCeCK-PGYAGngiIC 744  

                   e<-*
                       
     ej00565   745 G    745  

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