hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090525/iprscan-20090525-13393949/chunk_1/iprscan-20090525-13393949.nocrc
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Query sequence: ej00665
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00332                                                 338.5    4.4e-97   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00332    1/1     212   636 ..     1   338 []   338.5  4.4e-97

Alignments of top-scoring domains:
SM00332: domain 1 of 1, from 212 to 636: score 338.5, E = 4.4e-97
                   *->es.sgknlglryglgessmqgwrkpmEDahvirp.......ffgVfD
                      +   gkn +++ g+ +s++ +++ p+ED+ ++ +  ++++ + gVfD
     ej00665   212    PEfDGKNVSSILGF-DSNQLPANAPIEDRRSAATclqtrgmLLGVFD 257  

                   GHGGseaakflsknlheilaeelsfdkdeslkene.e.lk.d.ep.....
                   GH+G ++++ +s++l+ ++a +l  +++ ++ en+ e+++ + ++ + ++
     ej00665   258 GHAGCACSQAVSERLFYYIAVSLLPHETLLEIENAvEsGRaLlPIlqwhk 307  

                   ...................ess.e.r.ln.gdksledveealrkaFlrtd
                   ++++  +++ ++   ++ +++++e  +ln+g++++ dv+eal++aF+r+d
     ej00665   308 hpndyfskeasklyfnslrTYWqElIdLNtGESTDIDVKEALINAFKRLD 357  

                   eei........................sTAvvalirgnklyvANvGDSRa
                   ++i+ + + +++++  +    +   +++TA+va+++g +l+vAN+GDSRa
     ej00665   358 NDIsleaqvgdpnsflnylvlrvafsgATACVAHVDGVDLHVANTGDSRA 407  

                   vLcrngkd.swegvrtysavqLteDHkpsnedEreRIeaaGGevepidre
                   +L+ + +d+sw      sav L++DH++ ne+E+eR++ ++++ e  +++
     ej00665   408 MLGVQEEDgSW------SAVTLSNDHNAQNERELERLKLEHPKSE--AKS 449  

                   fvsngggvvwRvnGvvisLavsRalGDfelKk.ked.e.lie.....en.
                   +v ++     R++G    L++ Ra+GD+++K+++++++++ie++++++n+
     ej00665   450 VVKQD-----RLLGL---LMPFRAFGDVKFKWsIDLqKrVIEsgpdqLNd 491  

                   rlyekfdprlpgkepyvsaePevtvvelsqtlvptedddfliLASDGlWD
                   ++y+kf p+ ++++py++aePevt+++l      +++d+fl+LA+DGlW+
     ej00665   492 NEYTKFIPPNYHTPPYLTAEPEVTYHRL------RPQDKFLVLATDGLWE 535  

                   vlsnqeavdivrkhlrkgddk.evksaaqela.r.a.d....s.......
                    +  q++v iv + l+++++++++++  ++++ +++++  ++++++ ++ 
     ej00665   536 TMHRQDVVRIVGEYLTGMHHQqPIAVGGYKVTlGqMhGllteRrtkmssv 585  

                   .........l.r..skkhndpkeaaklLvdlAl.........kDNiTvvv
                    ++++  ++l r+ +++++     +++L +++  +++  +  +D+iT++v
     ej00665   586 fedqnaathLiRhaVGNNEFGTVDHERLSKMLSlpeelarmyRDDITIIV 635  

                   v<-*
                   v   
     ej00665   636 V    636  

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