hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20090618/iprscan-20090618-06271361/chunk_1/iprscan-20090618-06271361.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ej00726 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF01074.12.ls Glycosyl hydrolases family 38 N-termi 573.5 1.9e-169 1 PF01074.12.fs Glycosyl hydrolases family 38 N-termi 571.6 7e-169 1 PF07748.3.fs Glycosyl hydrolases family 38 C-termi 375.2 2e-110 1 PF07748.3.ls Glycosyl hydrolases family 38 C-termi 377.0 2.7e-110 1 PF09261.1.ls Alpha mannosidase, middle domain 135.6 1.3e-37 1 PF09261.1.fs Alpha mannosidase, middle domain 133.6 4.9e-37 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF01074.12.ls 1/1 305 636 .. 1 339 [] 573.5 1.9e-169 PF01074.12.fs 1/1 305 636 .. 1 339 [] 571.6 7e-169 PF09261.1.fs 1/1 640 726 .. 1 90 [] 133.6 4.9e-37 PF09261.1.ls 1/1 640 726 .. 1 90 [] 135.6 1.3e-37 PF07748.3.fs 1/1 786 1278 .. 1 634 [] 375.2 2e-110 PF07748.3.ls 1/1 786 1278 .. 1 634 [] 377.0 2.7e-110 Alignments of top-scoring domains: PF01074.12.ls: domain 1 of 1, from 305 to 636: score 573.5, E = 1.9e-169 *->kvhlvgHsHiDvaWLwtvdetYyGsnnIqrrkvqrtifsnvlklldr +v++v+HsH+D++WL+t+ +++ r k+q++ f+n++ +l++ ej00726 305 QVFVVPHSHNDPGWLKTFNDYF-------RDKTQYI-FNNMVLKLKE 343 ypefrFyiqseaqfyewwwedqpelfkkiVKklVaeGrlEpvGGgWVepD +++++F i+se++++ +ww+ ++k +VK l+++G+lE+v+GgWV+pD ej00726 344 DSRRKF-IWSEISYLSKWWDIIDIQKKDAVKSLIENGQLEIVTGGWVMPD 392 enlpsgeSliRQllyGqrffkeeFGcvrprvgWlPDpFGySatlPqilkq e++p++++li+Ql++G+++++ + G v+pr gW +DpFG+S+t++++l + ej00726 393 EATPHYFALIDQLIEGHQWLENNIG-VKPRSGWAIDPFGHSPTMAYLLNR 441 aGidyfltqrlhwndknkfaeqphleFiWrgsdGltgeseilThmlpfdy aG + +l+qr+h++ k++fa++++leF+Wr+ ++l++ ++il+hm+pf++ ej00726 442 AGLSHMLIQRVHYAVKKHFALHKTLEFFWRQNWDLGSVTDILCHMMPFYS 491 ydiphtCGpdptygfqfDFkrmpgeslcdddpivdpe.itdyNVkeraed ydiphtCGpdp++++qfDFkr+pg++ ++++v+pe+i +NV++ra++ ej00726 492 YDIPHTCGPDPKICCQFDFKRLPGGRFG-CPWGVPPEtIHPGNVQSRARM 540 lldqakkyadktrtnhvLlpfGdGFrYena.EwDggggptdelleyinrl lldq++k++ ++rt ++L p+Gd+FrY +++EwD +++++++l++y+n + ej00726 541 LLDQYRKKSKLFRTKVLLAPLGDDFRYCEYtEWDLQFKNYQQLFDYMN-S 589 qelpglpkvqygTpsdYFdalee....e.aaanetwptkdsgdfptyag< q++ ++k+q+gT+sd+Fdal + +++ + ++++ +p++ sgdf+tya+ ej00726 590 QSKF-KVKIQFGTLSDFFDALDKadetQrDKGQSMFPVL-SGDFFTYAD 636 -* ej00726 - - PF01074.12.fs: domain 1 of 1, from 305 to 636: score 571.6, E = 7e-169 *->kvhlvgHsHiDvaWLwtvdetYyGsnnIqrrkvqrtifsnvlklldr +v++v+HsH+D++WL+t+ +++ r k+q++ f+n++ +l++ ej00726 305 QVFVVPHSHNDPGWLKTFNDYF-------RDKTQYI-FNNMVLKLKE 343 ypefrFyiqseaqfyewwwedqpelfkkiVKklVaeGrlEpvGGgWVepD +++++F i+se++++ +ww+ ++k +VK l+++G+lE+v+GgWV+pD ej00726 344 DSRRKF-IWSEISYLSKWWDIIDIQKKDAVKSLIENGQLEIVTGGWVMPD 392 enlpsgeSliRQllyGqrffkeeFGcvrprvgWlPDpFGySatlPqilkq e++p++++li+Ql++G+++++ + G v+pr gW +DpFG+S+t++++l + ej00726 393 EATPHYFALIDQLIEGHQWLENNIG-VKPRSGWAIDPFGHSPTMAYLLNR 441 aGidyfltqrlhwndknkfaeqphleFiWrgsdGltgeseilThmlpfdy aG + +l+qr+h++ k++fa++++leF+Wr+ ++l++ ++il+hm+pf++ ej00726 442 AGLSHMLIQRVHYAVKKHFALHKTLEFFWRQNWDLGSVTDILCHMMPFYS 491 ydiphtCGpdptygfqfDFkrmpgeslcdddpivdpe.itdyNVkeraed ydiphtCGpdp++++qfDFkr+pg++ ++++v+pe+i +NV++ra++ ej00726 492 YDIPHTCGPDPKICCQFDFKRLPGGRFG-CPWGVPPEtIHPGNVQSRARM 540 lldqakkyadktrtnhvLlpfGdGFrYena.EwDggggptdelleyinrl lldq++k++ ++rt ++L p+Gd+FrY +++EwD +++++++l++y+n + ej00726 541 LLDQYRKKSKLFRTKVLLAPLGDDFRYCEYtEWDLQFKNYQQLFDYMN-S 589 qelpglpkvqygTpsdYFdalee....e.aaanetwptkdsgdfptyag< q++ ++k+q+gT+sd+Fdal + +++ + ++++ +p++ sgdf+tya+ ej00726 590 QSKF-KVKIQFGTLSDFFDALDKadetQrDKGQSMFPVL-SGDFFTYAD 636 -* ej00726 - - PF09261.1.fs: domain 1 of 1, from 640 to 726: score 133.6, E = 4.9e-37 *->EyHrGyYTSrpalKrlnRqlEslLraaElLsslasilggdnqenevi +y++Gy+TSrp++Kr++R +Es LraaE+L+ +a ++ + + i ej00726 640 HYWSGYFTSRPFYKRMDRIMESHLRAAEILYYFALRQAHKYK----I 682 l.kdykypkeeLeelWkalllnQFHDilPGssiqeVydDyakrl<-* ++++++ ++ L+e++++l+l+Q+HD+++G+++++V++Dy+ rl ej00726 683 NkFLSSSLYTALTEARRNLGLFQHHDAITGTAKDWVVVDYGTRL 726 PF09261.1.ls: domain 1 of 1, from 640 to 726: score 135.6, E = 1.3e-37 *->EyHrGyYTSrpalKrlnRqlEslLraaElLsslasilggdnqenevi +y++Gy+TSrp++Kr++R +Es LraaE+L+ +a ++ + + i ej00726 640 HYWSGYFTSRPFYKRMDRIMESHLRAAEILYYFALRQAHKYK----I 682 l.kdykypkeeLeelWkalllnQFHDilPGssiqeVydDyakrl<-* ++++++ ++ L+e++++l+l+Q+HD+++G+++++V++Dy+ rl ej00726 683 NkFLSSSLYTALTEARRNLGLFQHHDAITGTAKDWVVVDYGTRL 726 PF07748.3.fs: domain 1 of 1, from 786 to 1278: score 375.2, E = 2e-110 *->epvvvfNpLawtrnevVripvsspnvsv.desgeiteailaeedsgk + +vv+NpL+++r +V+++vssp v v ++s gk ej00726 786 RYLVVYNPLEQDRISLVSVYVSSPTVQVfSAS-------------GK 819 pvesQivpvpsiveelrytaylgrsrtsttkyellFllaevPplGyatyk pve+Q+++v++ + +++ t+ye+ F a++PplG+++yk ej00726 820 PVEVQVSAVWDTANTIS-----------ETAYEISF-RAHIPPLGLKVYK 857 ikkvakteevnelpsakaeislsnelslsqpiekvss.f.v.kkd.d..e i ++a +n++ + + ++++ e s+ f+++++ + ++ ej00726 858 ILESA---SSNSHLADYVLYKNKVE---------DSGiFtIkNMInTeeG 895 vilserrleNgylkvefdpdtGlltsiyDkengrevlaegagngvgnqfq ++l eN+++ ++fd tGl+++++ ke+g+++ v+ qf ej00726 896 ITL-----ENSFVLLRFDQ-TGLMKQMMTKEDGKHHE-------VNVQFS 932 lYedkPlyWaDAWDidgdyeekplelqedsgaylfrpngplrasirvkrk +Y+ + + ++ sgaylf+p+g+++++ ej00726 933 WYGT----------TIKRDK---------SGAYLFLPDGNAKPY------ 957 faveekvplvvvdGelvqevhqsesswisqvirlyagstrlyn.q.lldp v ++p+v v+ ++ +++ +++ + +rly+ q+++++ ej00726 958 --VYTTPPFV-----RVTHGRIYSE--VTCFFDHVTHRVRLYHiQgIEGQ 998 riefeteVdpwperekigkeLkvrFptdirsdkafYedqfGrverkRrrd +e+ ++Vd +r++ ++e+ + +++di s++ fY+d++G+++++R ++ ej00726 999 SVEVSNIVD---IRKVYNREIAMKISSDIKSQNRFYTDLNGYQIQPRMTL 1045 erlpthlnvnetswegayyEvpahrfiddsekRkpgYGvslLndskyGgs +lp ++++ y+++++++i+d+++R ++lL+++++G+s ej00726 1046 SKLP---------LQANVYPMTTMAYIQDAKHR-----LTLLSAQSLGVS 1081 sSirelaqdGqleLsLlRlsPtyPdpsaDAldGrhlfegLnenkct.nty s l +Gq+e+ ++R ++++D d+r+l++g+ +nk+t n + ej00726 1082 S----LN-SGQIEVIMDR------RLMQD--DNRGLEQGIQDNKITaNLF 1118 aLyphggswvsagvvkeayasypSllrrlasqeLnaPllvffteegdesa +++++++s v+ + k+ ++sypSll++ +s n+P++ ++ +++ ej00726 1119 RILLEKRSAVNTEEEKK-SVSYPSLLSHITSSLMNHPVIPMANKFS---- 1163 igsgaallssvsgleltpelplsvhlltlildaiKlAeDg.......... ++ +l++++s+l ++ lp+++hl++l ++ +++ ++++++ ej00726 1164 -SPTLELQGEFSPLQSS--LPCDIHLVNL--------RTIqskvgnghsn 1202 eeleasdglvLrryeslgergeatlrtlsgpvasvtvnltnllErllavv e +l+L+r ++++ + + ++++ + +++++ +++ll + v+ ej00726 1203 E-----AALILHRKGFDCRFSSKGTGLFCST-TQGKILVQKLLNKF-IVE 1245 slketsLtGnqel.kl.rlkwktkhPavGegkneeksrgevqdeevevtL sl++ sL+++++ + ++ ++ + L ej00726 1246 SLTPSSLSLMHSPpGTqNISE--------------------------INL 1269 kPfEIrTfr<-* +P+EI Tfr ej00726 1270 SPMEISTFR 1278 PF07748.3.ls: domain 1 of 1, from 786 to 1278: score 377.0, E = 2.7e-110 *->epvvvfNpLawtrnevVripvsspnvsv.desgeiteailaeedsgk + +vv+NpL+++r +V+++vssp v v ++s gk ej00726 786 RYLVVYNPLEQDRISLVSVYVSSPTVQVfSAS-------------GK 819 pvesQivpvpsiveelrytaylgrsrtsttkyellFllaevPplGyatyk pve+Q+++v++ + +++ t+ye+ F a++PplG+++yk ej00726 820 PVEVQVSAVWDTANTIS-----------ETAYEISF-RAHIPPLGLKVYK 857 ikkvakteevnelpsakaeislsnelslsqpiekvss.f.v.kkd.d..e i ++a +n++ + + ++++ e s+ f+++++ + ++ ej00726 858 ILESA---SSNSHLADYVLYKNKVE---------DSGiFtIkNMInTeeG 895 vilserrleNgylkvefdpdtGlltsiyDkengrevlaegagngvgnqfq ++l eN+++ ++fd tGl+++++ ke+g+++ v+ qf ej00726 896 ITL-----ENSFVLLRFDQ-TGLMKQMMTKEDGKHHE-------VNVQFS 932 lYedkPlyWaDAWDidgdyeekplelqedsgaylfrpngplrasirvkrk +Y+ + + ++ sgaylf+p+g+++++ ej00726 933 WYGT----------TIKRDK---------SGAYLFLPDGNAKPY------ 957 faveekvplvvvdGelvqevhqsesswisqvirlyagstrlyn.q.lldp v ++p+v v+ ++ +++ +++ + +rly+ q+++++ ej00726 958 --VYTTPPFV-----RVTHGRIYSE--VTCFFDHVTHRVRLYHiQgIEGQ 998 riefeteVdpwperekigkeLkvrFptdirsdkafYedqfGrverkRrrd +e+ ++Vd +r++ ++e+ + +++di s++ fY+d++G+++++R ++ ej00726 999 SVEVSNIVD---IRKVYNREIAMKISSDIKSQNRFYTDLNGYQIQPRMTL 1045 erlpthlnvnetswegayyEvpahrfiddsekRkpgYGvslLndskyGgs +lp ++++ y+++++++i+d+++R ++lL+++++G+s ej00726 1046 SKLP---------LQANVYPMTTMAYIQDAKHR-----LTLLSAQSLGVS 1081 sSirelaqdGqleLsLlRlsPtyPdpsaDAldGrhlfegLnenkct.nty s l +Gq+e+ ++R ++++D d+r+l++g+ +nk+t n + ej00726 1082 S----LN-SGQIEVIMDR------RLMQD--DNRGLEQGIQDNKITaNLF 1118 aLyphggswvsagvvkeayasypSllrrlasqeLnaPllvffteegdesa +++++++s v+ + k+ ++sypSll++ +s n+P++ ++ +++ ej00726 1119 RILLEKRSAVNTEEEKK-SVSYPSLLSHITSSLMNHPVIPMANKFS---- 1163 igsgaallssvsgleltpelplsvhlltlildaiKlAeDg.......... ++ +l++++s+l ++ lp+++hl++l ++ +++ ++++++ ej00726 1164 -SPTLELQGEFSPLQSS--LPCDIHLVNL--------RTIqskvgnghsn 1202 eeleasdglvLrryeslgergeatlrtlsgpvasvtvnltnllErllavv e +l+L+r ++++ + + ++++ + +++++ +++ll + v+ ej00726 1203 E-----AALILHRKGFDCRFSSKGTGLFCST-TQGKILVQKLLNKF-IVE 1245 slketsLtGnqel.kl.rlkwktkhPavGegkneeksrgevqdeevevtL sl++ sL+++++ + ++ ++ + L ej00726 1246 SLTPSSLSLMHSPpGTqNISE--------------------------INL 1269 kPfEIrTfr<-* +P+EI Tfr ej00726 1270 SPMEISTFR 1278 //