hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/smart.HMMs.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-20170182/chunk_1/iprscan-20080808-20170182.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ej00768 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- SM00667 28.3 0.0011 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- SM00667 1/1 90 122 .. 1 33 [] 28.3 0.0011 Alignments of top-scoring domains: SM00667: domain 1 of 1, from 90 to 122: score 28.3, E = 0.0011 *->rrselnrlileYLlenGyketaetlqkEtglsl<-* +++ ln+l+ e+Ll+n+yk t t+ E + ++ ej00768 90 EKRALNFLVNEFLLKNNYKLTSITFSDENDDQD 122 //