hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-20370750/chunk_1/iprscan-20080808-20370750.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ej00810 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00097.15.fs Zinc finger, C3HC4 type (RING finger) 14.5 8.5e-05 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00097.15.fs 1/1 1263 1296 .. 1 37 [. 14.5 8.5e-05 Alignments of top-scoring domains: PF00097.15.fs: domain 1 of 1, from 1263 to 1296: score 14.5, E = 8.5e-05 *->CrICleelkepsnd..fplilpCgHsGslkyfCrsCler<-* C ICl+ +k + +++++ CgH ++++Cl++ ej00810 1263 CSICLQQYKRRQEMadEIIVFSCGHL-----YHSFCLQN 1296 //