hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-06331269/chunk_1/iprscan-20090618-06331269.nocrc
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Query sequence: ej00868
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00620.17.fs RhoGAP domain                                  205.9    1.8e-60   1
PF00620.17.ls RhoGAP domain                                  207.8    2.3e-59   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00620.17.fs   1/1     353   502 ..     1   155 []   205.9  1.8e-60
PF00620.17.ls   1/1     353   502 ..     1   155 []   207.8  2.3e-59

Alignments of top-scoring domains:
PF00620.17.fs: domain 1 of 1, from 353 to 502: score 205.9, E = 1.8e-60
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      Pli++k+i+ +e+rGL+tEG+ R++G + rik L+++++   +   +
     ej00868   353    PLIFQKLISRIEERGLETEGLLRIPGAAIRIKNLCQELEAKFYEGTF 399  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerlea
                   ++e +  h++AslLKlF+ReLP+PLl+ e+ ++f + +++++++ ++l+a
     ej00868   400 NWESVKQHDAASLLKLFIRELPQPLLSVEYLKAFQA-VQNLPTKKQQLQA 448  

                   lrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLlr
                   l +l+ +LP+aNrdtL++Ll++L+rV++n e+NkMt+ N A+v++P+L+ 
     ej00868   449 LNLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMTVMNVAMVMAPNLFM 498  

                   ppdgdsad<-*
                   +    +a+   
     ej00868   499 C----HAL    502  

PF00620.17.ls: domain 1 of 1, from 353 to 502: score 207.8, E = 2.3e-59
                   *->PlivekCieflekrGLdtEGIyRvsGsksrikeLreafdrgedvdln
                      Pli++k+i+ +e+rGL+tEG+ R++G + rik L+++++   +   +
     ej00868   353    PLIFQKLISRIEERGLETEGLLRIPGAAIRIKNLCQELEAKFYEGTF 399  

                   dleeedvhvvAslLKlFLReLPePLltfelyeefieaaaksedeeerlea
                   ++e +  h++AslLKlF+ReLP+PLl+ e+ ++f + +++++++ ++l+a
     ej00868   400 NWESVKQHDAASLLKLFIRELPQPLLSVEYLKAFQA-VQNLPTKKQQLQA 448  

                   lrellrkLPpaNrdtLryLlahLnrVaqnsevNkMtahNLAivFgPtLlr
                   l +l+ +LP+aNrdtL++Ll++L+rV++n e+NkMt+ N A+v++P+L+ 
     ej00868   449 LNLLVILLPDANRDTLKALLEFLQRVIDNKEKNKMTVMNVAMVMAPNLFM 498  

                   ppdgdsad<-*
                   +    +a+   
     ej00868   499 C----HAL    502  

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