hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-21034836/chunk_1/iprscan-20080808-21034836.nocrc
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Query sequence: ej00931
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00887.9.ls Acyl CoA binding protein                       146.1    8.6e-41   1
PF00887.9.fs Acyl CoA binding protein                       144.2    1.3e-40   1
PF00378.10.fs Enoyl-CoA hydratase/isomerase family            31.9      1e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00887.9.fs   1/1      46   130 ..     1    89 []   144.2  1.3e-40
PF00887.9.ls   1/1      46   130 ..     1    89 []   146.1  8.6e-41
PF00378.10.fs   1/1     158   213 ..     1    59 [.    31.9    1e-08

Alignments of top-scoring domains:
PF00887.9.fs: domain 1 of 1, from 46 to 130: score 144.2, E = 1.3e-40
                   *->lqedFeaAaekvkkLkknGpvkPSneekLkLYsLYKQATvGDvnter
                      +q dFe     vk Lkk+    P+ne+kLkLY+LYKQAT+G++n ++
     ej00931    46    SQKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPK 88   

                   PGmfDlkgrAKWDAWnelkGmSkeeAmkaYIakVeeLiakya<-*
                   PG fDl+++AKWDAWn+l+++ ke A+++Y+++V++L  + +   
     ej00931    89 PGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLE    130  

PF00887.9.ls: domain 1 of 1, from 46 to 130: score 146.1, E = 8.6e-41
                   *->lqedFeaAaekvkkLkknGpvkPSneekLkLYsLYKQATvGDvnter
                      +q dFe     vk Lkk+    P+ne+kLkLY+LYKQAT+G++n ++
     ej00931    46    SQKDFENSMNQVKLLKKD----PGNEVKLKLYALYKQATEGPCNMPK 88   

                   PGmfDlkgrAKWDAWnelkGmSkeeAmkaYIakVeeLiakya<-*
                   PG fDl+++AKWDAWn+l+++ ke A+++Y+++V++L  + +   
     ej00931    89 PGVFDLINKAKWDAWNALGSLPKEAARQNYVDLVSSLSPSLE    130  

PF00378.10.fs: domain 1 of 1, from 158 to 213: score 31.9, E = 1e-08
                   *->avikldrPeeavNalsaelltElieAlekleqDpsvravVLtGagpg
                       +i ++rP+ ++Na+++e+ +E+  Al+++  D+s+   VLtG+ ++
     ej00931   158    TKIMFNRPK-KKNAINTEMYHEIMRALKAASKDDSIIT-VLTGN-GD 201  

                   aFsaGaDikema<-*
                   + s+G D++ ++   
     ej00931   202 YYSSGNDLTNFT    213  

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