hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-21101682/chunk_1/iprscan-20080808-21101682.nocrc
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Query sequence: ej00937
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00069.15.fs Protein kinase domain                          121.0    2.9e-34   2
PF00069.15.ls Protein kinase domain                           75.4    1.6e-19   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00069.15.ls   1/1     114   348 ..     1   287 []    75.4  1.6e-19
PF00069.15.fs   1/2     147   212 ..    57   131 ..    24.1    1e-06
PF00069.15.fs   2/2     256   348 ..   176   287 .]    96.9  2.1e-27

Alignments of top-scoring domains:
PF00069.15.ls: domain 1 of 1, from 114 to 348: score 75.4, E = 1.6e-19
                   *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr
                                    V +a  + tg++  +K+++ ++  +        
     ej00937   114    -------------HVSRALCIHTGRELRCKVFPIKHYQD-------- 139  

                   lsEiqilkrL.sHpNIvrlidvfedkdhlylVlEycegGLrvldLfdyls
                      i+    L+sH NI  + +v   +++ y+ +E   g     d ++y++
     ej00937   140 --KIRPYIQLpSHSNITGIVEVILGETKAYVFFEKDFG-----DMHSYVR 182  

                   etrrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnng
                      ++++l   e+ea + ++Qi+++++++H+  i+  DLK+  + ++ + 
     ej00937   183 ---SRKRL--REEEAARLFKQIVSAVAHCHQSAIVLGDLKLRKFVFSTEE 227  

                   vvdaflKiaDFGlAkkls..........t.sss.lttfvGTpwYmAPEvl
                    +             +l+ ++ ++++   + +  l++  G p Y++PE+l
     ej00937   228 RT-------------QLRlesledthimKgEDDaLSDKHGCPAYVSPEIL 264  

                   l.ggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgp
                   +++g++ g+++DvWSlGv+ly ll G+ PF ++     d+ +l+ ki+++
     ej00937   265 NtTGTYSGKAADVWSLGVMLYTLLVGRYPFHDS-----DPSALFSKIRRG 309  

                   plefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilq
                   ++ +++  +               + a+ Li+++L++ Ps+Rlta+eil 
     ej00937   310 QFCIPEHIS---------------PKARCLIRSLLRREPSERLTAPEILL 344  

                   HPwf<-*
                   HPwf   
     ej00937   345 HPWF    348  

PF00069.15.fs: domain 1 of 2, from 147 to 212: score 24.1, E = 1e-06
                   *->L.sHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylsetrrkg
                      L+sH NI  + +v   +++ y+ +E   g     d ++y++   +++
     ej00937   147    LpSHSNITGIVEVILGETKAYVFFEKDFG-----DMHSYVR---SRK 185  

                   pllfsedeakkialQilrgleYLHsngii<-*
                   +l   e+ea + ++Qi+++++++H+  i+   
     ej00937   186 RL--REEEAARLFKQIVSAVAHCHQSAIV    212  

PF00069.15.fs: domain 2 of 2, from 256 to 348: score 96.9, E = 2.1e-27
                   *->pwYmAPEvll.ggngygtkvDvWSlGvilyelltGkpPFsgevqdsl
                      p Y++PE+l+++g++ g+++DvWSlGv+ly ll G+ PF ++     
     ej00937   256    PAYVSPEILNtTGTYSGKAADVWSLGVMLYTLLVGRYPFHDS----- 297  

                   dqlqlirkilgpplefdspewdsisrsefrrlpnlseeakdLikkcLnkD
                   d+ +l+ ki+++++ +++  +               + a+ Li+++L++ 
     ej00937   298 DPSALFSKIRRGQFCIPEHIS---------------PKARCLIRSLLRRE 332  

                   PskRltaeeilqHPwf<-*
                   Ps+Rlta+eil HPwf   
     ej00937   333 PSERLTAPEILLHPWF    348  

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