hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-21232795/chunk_1/iprscan-20080808-21232795.nocrc
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Query sequence: ej00969
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00355                                                 357.3   9.5e-103  12

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00355      1/12    307   329 ..     1    23 []    29.8  0.00039
SM00355      2/12    335   357 ..     1    23 []    31.6  0.00011
SM00355      3/12    363   385 ..     1    23 []    27.7   0.0017
SM00355      4/12    391   413 ..     1    23 []    29.3  0.00053
SM00355      5/12    419   441 ..     1    23 []    32.1  7.8e-05
SM00355      6/12    447   469 ..     1    23 []    30.2  0.00028
SM00355      7/12    475   497 ..     1    23 []    29.9  0.00034
SM00355      8/12    503   525 ..     1    23 []    27.6   0.0017
SM00355      9/12    531   553 ..     1    23 []    31.9  8.7e-05
SM00355     10/12    559   581 ..     1    23 []    29.0  0.00065
SM00355     11/12    587   609 ..     1    23 []    27.1   0.0025
SM00355     12/12    615   637 ..     1    23 []    31.2  0.00015

Alignments of top-scoring domains:
SM00355: domain 1 of 12, from 307 to 329: score 29.8, E = 0.00039
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgksfs+  +L+ H+r+H   
     ej00969   307    FECTQ-CGKSFSQSyDLVIHQRTH    329  

SM00355: domain 2 of 12, from 335 to 357: score 31.6, E = 0.00011
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgksf++++ L+ H+r+H   
     ej00969   335    YECDL-CGKSFTQRsKLITHQRIH    357  

SM00355: domain 3 of 12, from 363 to 385: score 27.7, E = 0.0017
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + C ksf++ ++L+ H+r+H   
     ej00969   363    YQCIE-CRKSFRWNsNLIVHQRIH    385  

SM00355: domain 4 of 12, from 391 to 413: score 29.3, E = 0.00053
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgksfs+  +L+ H r+H   
     ej00969   391    YECTH-CGKSFSQSyELVTHKRTH    413  

SM00355: domain 5 of 12, from 419 to 441: score 32.1, E = 7.8e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      +kC++ Cgksfs+k +L+ H+r+H   
     ej00969   419    FKCTQ-CGKSFSQKyDLVVHQRTH    441  

SM00355: domain 6 of 12, from 447 to 469: score 30.2, E = 0.00028
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgksfs+ + L+ H+r+H   
     ej00969   447    YECNL-CGKSFSQSsKLITHQRIH    469  

SM00355: domain 7 of 12, from 475 to 497: score 29.9, E = 0.00034
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C + Cgksf++ ++L+ H+r+H   
     ej00969   475    YQCIE-CGKSFRWNsNLVIHQRIH    497  

SM00355: domain 8 of 12, from 503 to 525: score 27.6, E = 0.0017
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y C++ Cgksfs+  +L+ H r+H   
     ej00969   503    YDCTH-CGKSFSQSyQLVAHKRTH    525  

SM00355: domain 9 of 12, from 531 to 553: score 31.9, E = 8.7e-05
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C++ Cgk f++ ++L+rH+++H   
     ej00969   531    YECNE-CGKAFNRStQLIRHLQIH    553  

SM00355: domain 10 of 12, from 559 to 581: score 29.0, E = 0.00065
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ykC++ C+k f + + L+ H+r+H   
     ej00969   559    YKCNQ-CNKAFARSsYLVMHQRTH    581  

SM00355: domain 11 of 12, from 587 to 609: score 27.1, E = 0.0025
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      ++C++ Cgk fs  ++L  H r+H   
     ej00969   587    FECSQ-CGKAFSGSsNLLSHHRIH    609  

SM00355: domain 12 of 12, from 615 to 637: score 31.2, E = 0.00015
                   *->ykCpigCgksfssk.aLkrHmrvH<-*
                      y+C+  Cgksf+++++L+ H r+H   
     ej00969   615    YECSD-CGKSFRQQsQLVVHRRTH    637  

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