hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-21295642/chunk_1/iprscan-20080808-21295642.nocrc
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Query sequence: ej00975
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00231                                                 164.2    1.3e-44   1
SM00631                                                 146.1    3.8e-39   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00231    1/1     398   554 ..     1   199 []   164.2  1.3e-44
SM00631    1/1     578  1006 ..     1   324 []   146.1  3.8e-39

Alignments of top-scoring domains:
SM00231: domain 1 of 1, from 398 to 554: score 164.2, E = 1.3e-44
                   *->eCneplGleggeiadsqitassstgaarelgllgwaakiaRlngngl
                      +C+ p+G+e+++i d qi ass  +       +g +a ++Rln+ ++
     ej00975   398    KCP-PIGMESHRIEDNQIRASSMLR-------HGLGAQRGRLNMQTG 436  

                   ne..dygdgaWcpaknsledgifdtddphwilvDLgrklrtvtgvTitGr
                     ++dy+dgaWc+++++         +++wi vD +r ++++tgv it  
     ej00975   437 ATedDYYDGAWCAEDDA---------RTQWIEVDTRR-TTRFTGV-ITQG 475  

                   rrrgdgngngdwvtyyvvaykddrrdllerlnGetWttykdfdiengtge
                   r   d   ++d+vt+++v +++d+          tW++y+     ng+ e
     ej00975   476 R---DSSIHDDFVTTFFVGFSNDSQ---------TWVMYT-----NGY-E 507  

                   skvFggNadagtvvlndfppPivARYvRilPtaentratgwhngiilRlE
                   +++F gN+d++t+vl ++p+P+vAR++Ri+P++       w++  ++RlE
     ej00975   508 EMTFHGNVDKDTPVLSELPEPVVARFIRIYPLT-------WNGSLCMRLE 550  

                   LlGC<-*
                   +lGC   
     ej00975   551 VLGC    554  

SM00631: domain 1 of 1, from 578 to 1006: score 146.1, E = 3.8e-39
                   *->YhsyeeinawlddLarnyPdltsVslisiGksyeGRpikvlki....
                      +hsy+++ + ++ ++++ P +t+   +s+Gks  G  i++++i++++
     ej00975   578    HHSYKDMRQLMKVVNEECPTITR--TYSLGKSSRGLKIYAMEIsdnp 622  

                   ......kpavfidagiHAREWiapatalylinqLltneteYskdpddegs
                   ++++ ++p++ ++agiH++E+ +++ +l l ++L+++     +d + +  
     ej00975   623 gehelgEPEFRYTAGIHGNEVLGRELLLLLMQYLCRE----YRDGNPR-- 666  

                   vtklLdkldwyivPvmNPDGYeythts..tdRlWRKnRspngasgs....
                   v+ l++++++++vP++NPDGYe   ++++    W  +  +     + +  
     ej00975   667 VRSLVQDTRIHLVPSLNPDGYEVAAQMgsEFGNWALGLWTEE---Gfdif 713  

                   ..................................................
                   ++ ++ ++   + ++++  + + ++++ + +++  +++ + +++ +    
     ej00975   714 edfpdlnsvlwgaeerkwvpyrvpnnnlpiperylspdatvstevraiia 763  

                   ..................................................
                     ++++   + + +++++  + + +  +++++++         +++++++
     ej00975   764 wmeknpfvlganlnggerlvsypydmartptqeqllaaamaaargedede 813  

                   ...............................................q.g
                    ++ ++++++   +    +  + + + +++ +++ + ++ +++ +   + 
     ej00975   814 vseaqetpdhaifrwlaisfasahltltepyrggcqaqdytggmgivNgA 863  

                   twynCyGvDlNRNfdfhnWgeigGssslpCsetYaGsspfSeWEpEtkal
                    w +  G+  ++ ++++n+ e   s +l+C++++++s++++eWE++++al
     ej00975   864 KWNPRTGTINDFSYLHTNCLEL--SFYLGCDKFPHESELPREWENNKEAL 911  

                   ldfilsneigkgrikayislHsysqlllyPyGytnatvppngedlhkeva
                   l f++         +++ ++++ + +  ++ +++nat+++ g ++h   +
     ej00975   912 LTFME---------QVHRGIKGVVTDE-QGIPIANATISVSG-INH---G 947  

                   kaaakaigdyyfgGtlYtpGsssadpdlditlYpasGgsdDwaygtlkgv
                   +++a+  gdy+   ++++pG           +Y +++ ++++ ++++  +
     ej00975   948 VKTAS-GGDYW---RILNPG-----------EYRVTAHAEGYTPSAKT-C 981  

                   kysytiELrdtgddagrygFlLppscvkpvrmeqiiptgeE<-*
                    ++y i        a++++F+L          +++  +++E   
     ej00975   982 NVDYDIG-------ATQCNFILA---------RSNWKRIRE    1006 

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