# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oej01005.fasta.nr -Q ej01005.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ej01005, 779 aa vs /cdna2/lib/nr/nr library 3020366983 residues in 8842601 sequences statistics sampled from 60000 to 8834458 sequences Expectation_n fit: rho(ln(x))= 5.9983+/-0.000196; mu= 9.6872+/- 0.011 mean_var=111.1625+/-21.095, 0's: 26 Z-trim: 47 B-trim: 145 in 1/65 Lambda= 0.121645 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8842601) gi|194379500|dbj|BAG63716.1| unnamed protein produ ( 761) 4916 874.1 0 gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full= ( 745) 4839 860.5 0 gi|119602055|gb|EAW81649.1| poly(A) polymerase alp ( 744) 4820 857.2 0 gi|194038370|ref|XP_001929110.1| PREDICTED: simila ( 739) 4745 844.0 0 gi|149737664|ref|XP_001489128.1| PREDICTED: simila ( 755) 4723 840.2 0 gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Po ( 739) 4717 839.1 0 gi|73964450|ref|XP_537551.2| PREDICTED: similar to ( 812) 4705 837.1 0 gi|28207949|emb|CAD62628.1| unnamed protein produc ( 752) 4687 833.9 0 gi|126290553|ref|XP_001375249.1| PREDICTED: simila ( 738) 4653 827.9 0 gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full= ( 739) 4641 825.8 0 gi|74210049|dbj|BAE21312.1| unnamed protein produc ( 739) 4628 823.5 0 gi|149044213|gb|EDL97595.1| poly (A) polymerase al ( 739) 4619 821.9 0 gi|148686800|gb|EDL18747.1| poly (A) polymerase al ( 736) 4616 821.4 0 gi|149636914|ref|XP_001511509.1| PREDICTED: simila ( 736) 4609 820.2 0 gi|194379056|dbj|BAG58079.1| unnamed protein produ ( 740) 4450 792.3 0 gi|148686802|gb|EDL18749.1| poly (A) polymerase al ( 729) 4423 787.5 0 gi|118091978|ref|XP_421352.2| PREDICTED: similar t ( 737) 4381 780.2 0 gi|74354794|gb|AAI02482.1| PAPOLA protein [Bos tau ( 693) 4269 760.5 0 gi|643|emb|CAA45031.1| poly(A) polymerase [Bos tau ( 689) 4256 758.2 2.7e-216 gi|228152|prf||1717389A poly(A) polymerase ( 689) 4247 756.6 8.1e-216 gi|38303906|gb|AAH61931.1| Pap protein [Xenopus la ( 731) 3843 685.7 1.9e-194 gi|197246240|gb|AAI68811.1| Unknown (protein for M ( 732) 3843 685.7 1.9e-194 gi|194678719|ref|XP_001790594.1| PREDICTED: simila ( 642) 3684 657.8 4.3e-186 gi|1709571|sp|P51004.1|PAPO1_XENLA RecName: Full=P ( 715) 3652 652.2 2.3e-184 gi|3127182|gb|AAC16061.1| poly(A) polymerase II [G ( 621) 3641 650.2 7.8e-184 gi|50927350|gb|AAH79046.1| Poly (A) polymerase bet ( 642) 3626 647.6 5e-183 gi|18203580|sp|Q9WVP6.2|PAPOB_MOUSE RecName: Full= ( 641) 3621 646.7 9.1e-183 gi|5701744|dbj|BAA83086.1| testis-specific poly(A) ( 642) 3621 646.7 9.1e-183 gi|5456696|gb|AAD43624.1|AF039957_1 testis-specifi ( 641) 3617 646.0 1.5e-182 gi|67971414|dbj|BAE02049.1| unnamed protein produc ( 548) 3549 634.0 5.2e-179 gi|18203318|sp|Q9NRJ5.1|PAPOB_HUMAN RecName: Full= ( 636) 3527 630.2 8.4e-178 gi|51094718|gb|EAL23967.1| poly(A) polymerase beta ( 637) 3527 630.2 8.4e-178 gi|123980646|gb|ABM82152.1| poly(A) polymerase bet ( 636) 3519 628.8 2.2e-177 gi|34193801|gb|AAH36653.2| Poly(A) polymerase beta ( 637) 3519 628.8 2.2e-177 gi|67972178|dbj|BAE02431.1| unnamed protein produc ( 637) 3516 628.3 3.2e-177 gi|119359931|dbj|BAF41975.1| testis-specific poly( ( 637) 3489 623.6 8.5e-176 gi|55669560|pdb|1Q78|A Chain A, Crystal Structure ( 514) 3368 602.2 1.8e-169 gi|55669561|pdb|1Q79|A Chain A, Crystal Structure ( 514) 3353 599.6 1.1e-168 gi|148686801|gb|EDL18748.1| poly (A) polymerase al ( 540) 3325 594.7 3.5e-167 gi|10835833|pdb|1F5A|A Chain A, Crystal Structure ( 513) 3321 594.0 5.5e-167 gi|119602049|gb|EAW81643.1| poly(A) polymerase alp ( 495) 3187 570.5 6.4e-160 gi|55962705|emb|CAI11732.1| polyA polymerase alpha ( 723) 3154 564.8 4.7e-158 gi|115530785|emb|CAL49411.1| poly(A) polymerase al ( 474) 2998 537.3 6e-150 gi|13365529|dbj|BAB39138.1| poly(A) polymerase [Ca ( 747) 2851 511.7 4.9e-142 gi|13365531|dbj|BAB39139.1| poly(A) polymerase [Ca ( 747) 2848 511.1 7e-142 gi|122890852|emb|CAM12938.1| poly(A) polymerase ga ( 744) 2818 505.9 2.7e-140 gi|34783795|gb|AAH56818.1| Poly(A) polymerase gamm ( 744) 2818 505.9 2.7e-140 gi|116242699|sp|Q9BWT3.2|PAPOG_HUMAN RecName: Full ( 736) 2817 505.7 3e-140 gi|81885554|sp|Q6PCL9.1|PAPOG_MOUSE RecName: Full= ( 739) 2817 505.7 3e-140 gi|119620435|gb|EAX00030.1| poly(A) polymerase gam ( 743) 2817 505.7 3e-140 >>gi|194379500|dbj|BAG63716.1| unnamed protein product [ (761 aa) initn: 4916 init1: 4916 opt: 4916 Z-score: 4665.7 bits: 874.1 E(): 0 Smith-Waterman score: 4916; 99.736% identity (99.736% similar) in 758 aa overlap (22-779:4-761) 10 20 30 40 50 60 ej0100 GRPPPPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPI : ::::::::::::::::::::::::::::::::::::: gi|194 MLGRRGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPI 10 20 30 40 70 80 90 100 110 120 ej0100 SLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SLAAPKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLP 50 60 70 80 90 100 130 140 150 160 170 180 ej0100 QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QSVIENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDL 110 120 130 140 150 160 190 200 210 220 230 240 ej0100 RAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RAVEEAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRV 170 180 190 200 210 220 250 260 270 280 290 300 ej0100 TDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIAS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TDEILHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIAS 230 240 250 260 270 280 310 320 330 340 350 360 ej0100 TLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 TLVHKFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNST 290 300 310 320 330 340 370 380 390 400 410 420 ej0100 YNVSVSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQ :::::::::::::::::: ::::::::::::::::::::::::::::::::::::::::: gi|194 YNVSVSTRMVMVEEFKQGPAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQ 350 360 370 380 390 400 430 440 450 460 470 480 ej0100 RLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RLEWVGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKT 410 420 430 440 450 460 490 500 510 520 530 540 ej0100 ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ENSENLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKK 470 480 490 500 510 520 550 560 570 580 590 600 ej0100 KHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KHSTEGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAA 530 540 550 560 570 580 610 620 630 640 650 660 ej0100 SVTNIQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 SVTNIQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPP 590 600 610 620 630 640 670 680 690 700 710 720 ej0100 RSSGNAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKT :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 RSSGNAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKT 650 660 670 680 690 700 730 740 750 760 770 ej0100 EAKEQLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EAKEQLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 710 720 730 740 750 760 >>gi|59803092|sp|P51003.4|PAPOA_HUMAN RecName: Full=Poly (745 aa) initn: 4839 init1: 4839 opt: 4839 Z-score: 4592.8 bits: 860.5 E(): 0 Smith-Waterman score: 4839; 100.000% identity (100.000% similar) in 745 aa overlap (35-779:1-745) 10 20 30 40 50 60 ej0100 PPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAA :::::::::::::::::::::::::::::: gi|598 MPFPVTTQGSQQTQPPQKHYGITSPISLAA 10 20 30 70 80 90 100 110 120 ej0100 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI 40 50 60 70 80 90 130 140 150 160 170 180 ej0100 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE 100 110 120 130 140 150 190 200 210 220 230 240 ej0100 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 160 170 180 190 200 210 250 260 270 280 290 300 ej0100 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 220 230 240 250 260 270 310 320 330 340 350 360 ej0100 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 280 290 300 310 320 330 370 380 390 400 410 420 ej0100 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW 340 350 360 370 380 390 430 440 450 460 470 480 ej0100 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE 400 410 420 430 440 450 490 500 510 520 530 540 ej0100 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST 460 470 480 490 500 510 550 560 570 580 590 600 ej0100 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN 520 530 540 550 560 570 610 620 630 640 650 660 ej0100 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG 580 590 600 610 620 630 670 680 690 700 710 720 ej0100 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE 640 650 660 670 680 690 730 740 750 760 770 ej0100 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|598 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 700 710 720 730 740 >>gi|119602055|gb|EAW81649.1| poly(A) polymerase alpha, (744 aa) initn: 3683 init1: 3683 opt: 4820 Z-score: 4574.8 bits: 857.2 E(): 0 Smith-Waterman score: 4820; 99.866% identity (99.866% similar) in 745 aa overlap (35-779:1-744) 10 20 30 40 50 60 ej0100 PPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAA :::::::::::::::::::::::::::::: gi|119 MPFPVTTQGSQQTQPPQKHYGITSPISLAA 10 20 30 70 80 90 100 110 120 ej0100 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI 40 50 60 70 80 90 130 140 150 160 170 180 ej0100 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE 100 110 120 130 140 150 190 200 210 220 230 240 ej0100 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 160 170 180 190 200 210 250 260 270 280 290 300 ej0100 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 220 230 240 250 260 270 310 320 330 340 350 360 ej0100 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 280 290 300 310 320 330 370 380 390 400 410 420 ej0100 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW 340 350 360 370 380 390 430 440 450 460 470 480 ej0100 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE 400 410 420 430 440 450 490 500 510 520 530 540 ej0100 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST 460 470 480 490 500 510 550 560 570 580 590 600 ej0100 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN ::::::::::::::::::::::::::::::::::::::::::::: :::::::::::::: gi|119 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQG-NSPAPAVTAASVTN 520 530 540 550 560 610 620 630 640 650 660 ej0100 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG 570 580 590 600 610 620 670 680 690 700 710 720 ej0100 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE 630 640 650 660 670 680 730 740 750 760 770 ej0100 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 690 700 710 720 730 740 >>gi|194038370|ref|XP_001929110.1| PREDICTED: similar to (739 aa) initn: 4125 init1: 4125 opt: 4745 Z-score: 4503.7 bits: 844.0 E(): 0 Smith-Waterman score: 4745; 98.121% identity (98.792% similar) in 745 aa overlap (35-779:1-739) 10 20 30 40 50 60 ej0100 PPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAA :::::::::::::::::::::::::::::: gi|194 MPFPVTTQGSQQTQPPQKHYGITSPISLAA 10 20 30 70 80 90 100 110 120 ej0100 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 PKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI 40 50 60 70 80 90 130 140 150 160 170 180 ej0100 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE 100 110 120 130 140 150 190 200 210 220 230 240 ej0100 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 160 170 180 190 200 210 250 260 270 280 290 300 ej0100 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 220 230 240 250 260 270 310 320 330 340 350 360 ej0100 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 280 290 300 310 320 330 370 380 390 400 410 420 ej0100 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW 340 350 360 370 380 390 430 440 450 460 470 480 ej0100 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE 400 410 420 430 440 450 490 500 510 520 530 540 ej0100 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST 460 470 480 490 500 510 550 560 570 580 590 600 ej0100 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN .::.:: :::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|194 DGVRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTN 520 530 540 550 560 570 610 620 630 640 650 660 ej0100 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG ::::::::::::::::::::::::::::::::::::::::::::::::::::::::: :: gi|194 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRPSG 580 590 600 610 620 630 670 680 690 700 710 720 ej0100 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE ::: ::::.::::::::::::::::::::.::::::::::::::::::::::::: gi|194 NAA------TKIPNPIVGVKRTSSPHKEESPKKTRTEEDETSEDANCLALSGHDKTEAKE 640 650 660 670 680 730 740 750 760 770 ej0100 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|194 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 690 700 710 720 730 >>gi|149737664|ref|XP_001489128.1| PREDICTED: similar to (755 aa) initn: 4105 init1: 4105 opt: 4723 Z-score: 4482.7 bits: 840.2 E(): 0 Smith-Waterman score: 4723; 98.116% identity (98.789% similar) in 743 aa overlap (37-779:19-755) 10 20 30 40 50 60 ej0100 SRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAAPK .::::::::::::::::::::::::::::: gi|149 MSSNFKGLQFESCVLVFLLPVTTQGSQQTQPPQKHYGITSPISLAAPK 10 20 30 40 70 80 90 100 110 120 ej0100 ETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIEN ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 ETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIEN 50 60 70 80 90 100 130 140 150 160 170 180 ej0100 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 VGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEA 110 120 130 140 150 160 190 200 210 220 230 240 ej0100 FVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILH 170 180 190 200 210 220 250 260 270 280 290 300 ej0100 LVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKF 230 240 250 260 270 280 310 320 330 340 350 360 ej0100 FLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVS 290 300 310 320 330 340 370 380 390 400 410 420 ej0100 TRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 TRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVG 350 360 370 380 390 400 430 440 450 460 470 480 ej0100 LVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 LVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENL 410 420 430 440 450 460 490 500 510 520 530 540 ej0100 SVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEG 470 480 490 500 510 520 550 560 570 580 590 600 ej0100 VKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQ :.:: :::::::::::::::::::::::: :::::::::::::::::::::::::::::: gi|149 VRLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNIQ 530 540 550 560 570 580 610 620 630 640 650 660 ej0100 ATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSGNA ::::::::::::::::::::::::::::::::::::::::::::::::::::::: :::: gi|149 ATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRPSGNA 590 600 610 620 630 640 670 680 690 700 710 720 ej0100 ATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKEQL :: :::.:::::::::::::::::::::::::::::::::::::::::::.:::: gi|149 AT------KIPNPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTETKEQL 650 660 670 680 690 700 730 740 750 760 770 ej0100 DTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR ::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 DTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 710 720 730 740 750 >>gi|464345|sp|P25500.3|PAPOA_BOVIN RecName: Full=Poly(A (739 aa) initn: 4104 init1: 4104 opt: 4717 Z-score: 4477.1 bits: 839.1 E(): 0 Smith-Waterman score: 4717; 97.450% identity (98.658% similar) in 745 aa overlap (35-779:1-739) 10 20 30 40 50 60 ej0100 PPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAA :::::::::::::::::::::::::::::: gi|464 MPFPVTTQGSQQTQPPQKHYGITSPISLAA 10 20 30 70 80 90 100 110 120 ej0100 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI ::::::.:::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|464 PKETDCLLTQKLVETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI 40 50 60 70 80 90 130 140 150 160 170 180 ej0100 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|464 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE 100 110 120 130 140 150 190 200 210 220 230 240 ej0100 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|464 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 160 170 180 190 200 210 250 260 270 280 290 300 ej0100 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|464 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 220 230 240 250 260 270 310 320 330 340 350 360 ej0100 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|464 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 280 290 300 310 320 330 370 380 390 400 410 420 ej0100 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|464 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW 340 350 360 370 380 390 430 440 450 460 470 480 ej0100 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|464 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE 400 410 420 430 440 450 490 500 510 520 530 540 ej0100 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST ::::::::::::::::::::::::::::::::::::::::::::::::.::::::::::: gi|464 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPSHVLQKKKKHST 460 470 480 490 500 510 550 560 570 580 590 600 ej0100 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN :::::: :::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|464 EGVKLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTN 520 530 540 550 560 570 610 620 630 640 650 660 ej0100 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG :::::::.::.:::::::::::::::::::::::: ::::::::::::::::::::: :: gi|464 IQATEVSLPQINSSESSGGTSSESIPQTATQPAISSPPKPTVSRVVSSTRLVNPPPRPSG 580 590 600 610 620 630 670 680 690 700 710 720 ej0100 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE ::: .:::.:::::::::::::::::::::::::::::::::::::::::::.:: gi|464 NAA------AKIPNPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTETKE 640 650 660 670 680 730 740 750 760 770 ej0100 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR :::::::::::::::::.::::::::::::::::::::::::::::::::::::: gi|464 QLDTETSTTQSETIQTATSLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 690 700 710 720 730 >>gi|73964450|ref|XP_537551.2| PREDICTED: similar to pol (812 aa) initn: 4093 init1: 4093 opt: 4705 Z-score: 4465.2 bits: 837.1 E(): 0 Smith-Waterman score: 4705; 97.844% identity (98.652% similar) in 742 aa overlap (38-779:77-812) 10 20 30 40 50 60 ej0100 RLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAAPKE :::::::::::::::::::::::::::::: gi|739 NSQELAMGWLQLVSDCRNPLAVILSNFVCSPVTTQGSQQTQPPQKHYGITSPISLAAPKE 50 60 70 80 90 100 70 80 90 100 110 120 ej0100 TDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENV :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENV 110 120 130 140 150 160 130 140 150 160 170 180 ej0100 GGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAF 170 180 190 200 210 220 190 200 210 220 230 240 ej0100 VPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHL 230 240 250 260 270 280 250 260 270 280 290 300 ej0100 VPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFF 290 300 310 320 330 340 310 320 330 340 350 360 ej0100 LVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVST 350 360 370 380 390 400 370 380 390 400 410 420 ej0100 RMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 410 420 430 440 450 460 430 440 450 460 470 480 ej0100 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENLS 470 480 490 500 510 520 490 500 510 520 530 540 ej0100 VDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGV 530 540 550 560 570 580 550 560 570 580 590 600 ej0100 KLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQA .:: :::::::::::::::::::::::: :::::::::::::::::::::::::::: :: gi|739 RLTPLNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTNPQA 590 600 610 620 630 640 610 620 630 640 650 660 ej0100 TEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAA ::::::::::.::::::::::::::::::::::::::::::::::::::::::: ::::: gi|739 TEVSVPQVNSTESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRPSGNAA 650 660 670 680 690 700 670 680 690 700 710 720 ej0100 TSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKEQLD : :::.:::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 T------KIPNPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTETKEQLD 710 720 730 740 750 760 730 740 750 760 770 ej0100 TETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR :::::::::::.:::::::::::::::::::::::::::::::::::::::: gi|739 TETSTTQSETIHTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 770 780 790 800 810 >>gi|28207949|emb|CAD62628.1| unnamed protein product [H (752 aa) initn: 4687 init1: 4687 opt: 4687 Z-score: 4448.6 bits: 833.9 E(): 0 Smith-Waterman score: 4687; 100.000% identity (100.000% similar) in 722 aa overlap (38-759:31-752) 10 20 30 40 50 60 ej0100 RLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAAPKE :::::::::::::::::::::::::::::: gi|282 GTSNSPGHSSFSAPSTKKIKTTRKQNIAWCPVTTQGSQQTQPPQKHYGITSPISLAAPKE 10 20 30 40 50 60 70 80 90 100 110 120 ej0100 TDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVIENV 70 80 90 100 110 120 130 140 150 160 170 180 ej0100 GGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 GGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVEEAF 130 140 150 160 170 180 190 200 210 220 230 240 ej0100 VPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 VPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEILHL 190 200 210 220 230 240 250 260 270 280 290 300 ej0100 VPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFF :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 VPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVHKFF 250 260 270 280 290 300 310 320 330 340 350 360 ej0100 LVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVST :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 LVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVSVST 310 320 330 340 350 360 370 380 390 400 410 420 ej0100 RMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 RMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEWVGL 370 380 390 400 410 420 430 440 450 460 470 480 ej0100 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 VESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSENLS 430 440 450 460 470 480 490 500 510 520 530 540 ej0100 VDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 VDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHSTEGV 490 500 510 520 530 540 550 560 570 580 590 600 ej0100 KLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 KLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTNIQA 550 560 570 580 590 600 610 620 630 640 650 660 ej0100 TEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSGNAA 610 620 630 640 650 660 670 680 690 700 710 720 ej0100 TSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKEQLD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|282 TSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKEQLD 670 680 690 700 710 720 730 740 750 760 770 ej0100 TETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR :::::::::::::::::::::::::::::::: gi|282 TETSTTQSETIQTAASLLASQKTSSTDLSDIP 730 740 750 >>gi|126290553|ref|XP_001375249.1| PREDICTED: similar to (738 aa) initn: 4008 init1: 3368 opt: 4653 Z-score: 4416.4 bits: 827.9 E(): 0 Smith-Waterman score: 4653; 96.242% identity (97.987% similar) in 745 aa overlap (35-779:1-738) 10 20 30 40 50 60 ej0100 PPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAA :::::::::::::::::::::::::::::: gi|126 MPFPVTTQGSQQTQPPQKHYGITSPISLAA 10 20 30 70 80 90 100 110 120 ej0100 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI ::::::.:.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 PKETDCILAQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI 40 50 60 70 80 90 130 140 150 160 170 180 ej0100 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE ::::::::::::::::::::::::::::::::::::::::::::.::::::::::::::: gi|126 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYEKLKLQEEVKDLRAVE 100 110 120 130 140 150 190 200 210 220 230 240 ej0100 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 160 170 180 190 200 210 250 260 270 280 290 300 ej0100 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 220 230 240 250 260 270 310 320 330 340 350 360 ej0100 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 280 290 300 310 320 330 370 380 390 400 410 420 ej0100 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW 340 350 360 370 380 390 430 440 450 460 470 480 ej0100 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|126 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE 400 410 420 430 440 450 490 500 510 520 530 540 ej0100 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST ::::::::::::::::::::::::::::.:::::::::::.::::::::::::::::::. gi|126 NLSVDLTYDIQSFTDTVYRQAINSKMFEMDMKIAAMHVKRRQLHQLLPNHVLQKKKKHSS 460 470 480 490 500 510 550 560 570 580 590 600 ej0100 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN : :.::::::::::::::::::::::::::: :::::::::::::::::::::::::::: gi|126 E-VRLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTN 520 530 540 550 560 610 620 630 640 650 660 ej0100 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG ::::::::::::::::::::::::::::::::::::::::::::::::::::: ::: :: gi|126 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNQPPRPSG 570 580 590 600 610 620 670 680 690 700 710 720 ej0100 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE :.: ::.:.:::::::::::::::::::::::::::::::::: : ::: :.:: gi|126 NTA------TKVPNPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLDLIEHDKQETKE 630 640 650 660 670 680 730 740 750 760 770 ej0100 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR :::::::::::::.:::: :::.:::::::::::::::::::::::::::::::: gi|126 QLDTETSTTQSETLQTAAPLLAAQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 690 700 710 720 730 >>gi|25090856|sp|Q61183.4|PAPOA_MOUSE RecName: Full=Poly (739 aa) initn: 4071 init1: 4071 opt: 4641 Z-score: 4405.1 bits: 825.8 E(): 0 Smith-Waterman score: 4641; 95.436% identity (98.255% similar) in 745 aa overlap (35-779:1-739) 10 20 30 40 50 60 ej0100 PPSRLSGSCPGRQRRRLRGGSDWAVPAPETMPFPVTTQGSQQTQPPQKHYGITSPISLAA :::::::::::::::::.:::::::::::: gi|250 MPFPVTTQGSQQTQPPQRHYGITSPISLAA 10 20 30 70 80 90 100 110 120 ej0100 PKETDCVLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI ::::::.::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 PKETDCLLTQKLIETLKPFGVFEEEEELQRRILILGKLNNLVKEWIREISESKNLPQSVI 40 50 60 70 80 90 130 140 150 160 170 180 ej0100 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 ENVGGKIFTFGSYRLGVHTKGADIDALCVAPRHVDRSDFFTSFYDKLKLQEEVKDLRAVE 100 110 120 130 140 150 190 200 210 220 230 240 ej0100 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 EAFVPVIKLCFDGIEIDILFARLALQTIPEDLDLRDDSLLKNLDIRCIRSLNGCRVTDEI 160 170 180 190 200 210 250 260 270 280 290 300 ej0100 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 LHLVPNIDNFRLTLRAIKLWAKRHNIYSNILGFLGGVSWAMLVARTCQLYPNAIASTLVH 220 230 240 250 260 270 310 320 330 340 350 360 ej0100 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 KFFLVFSKWEWPNPVLLKQPEECNLNLPVWDPRVNPSDRYHLMPIITPAYPQQNSTYNVS 280 290 300 310 320 330 370 380 390 400 410 420 ej0100 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|250 VSTRMVMVEEFKQGLAITDEILLSKAEWSKLFEAPNFFQKYKHYIVLLASAPTEKQRLEW 340 350 360 370 380 390 430 440 450 460 470 480 ej0100 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKENPDKEEFRTMWVIGLVFKKTENSE ::::::::::::::::::::::::::::::::::::.::.:::::::::::::::::::: gi|250 VGLVESKIRILVGSLEKNEFITLAHVNPQSFPAPKESPDREEFRTMWVIGLVFKKTENSE 400 410 420 430 440 450 490 500 510 520 530 540 ej0100 NLSVDLTYDIQSFTDTVYRQAINSKMFEVDMKIAAMHVKRKQLHQLLPNHVLQKKKKHST ::::::::::::::::::::::::::::.:::::::::::::::::::.:::::.::::: gi|250 NLSVDLTYDIQSFTDTVYRQAINSKMFELDMKIAAMHVKRKQLHQLLPSHVLQKRKKHST 460 470 480 490 500 510 550 560 570 580 590 600 ej0100 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSATKTSPLNSSGSSQGRNSPAPAVTAASVTN ::::::::::::::::::::::::::::::: :::::::::::::::::::::::::::. gi|250 EGVKLTALNDSSLDLSMDSDNSMSVPSPTSAMKTSPLNSSGSSQGRNSPAPAVTAASVTS 520 530 540 550 560 570 610 620 630 640 650 660 ej0100 IQATEVSVPQVNSSESSGGTSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPPPRSSG :::.::::::.::::: :: :::::::::::::::::::::::::::::::::: :: :: gi|250 IQASEVSVPQANSSESPGGPSSESIPQTATQPAISPPPKPTVSRVVSSTRLVNPSPRPSG 580 590 600 610 620 630 670 680 690 700 710 720 ej0100 NAATSGNAATKIPTPIVGVKRTSSPHKEESPKKTKTEEDETSEDANCLALSGHDKTEAKE :.: ::.:.:::::::::::.:::::::::::::::::::::::::::::::.:: gi|250 NTA------TKVPNPIVGVKRTSSPNKEESPKKTKTEEDETSEDANCLALSGHDKTETKE 640 650 660 670 680 730 740 750 760 770 ej0100 QLDTETSTTQSETIQTAASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR :.: :::..::::. ..:::::::::::::::::::::::::::::::::::::: gi|250 QVDLETSAVQSETVPASASLLASQKTSSTDLSDIPALPANPIPVIKNSIKLRLNR 690 700 710 720 730 779 residues in 1 query sequences 3020366983 residues in 8842601 library sequences Tcomplib [34.26] (8 proc) start: Mon May 25 13:42:54 2009 done: Mon May 25 13:45:23 2009 Total Scan time: 1263.180 Total Display time: 0.370 Function used was FASTA [version 34.26.5 April 26, 2007]