hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-21553484/chunk_1/iprscan-20080808-21553484.nocrc
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Query sequence: ej01034
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00595.14.ls PDZ domain (Also known as DHR or GLGF)    211.8    1.5e-60   3
PF00595.14.fs PDZ domain (Also known as DHR or GLGF)    206.0    8.2e-59   3
PF07653.7.fs  Variant SH3 domain                         26.9    4.3e-07   1
PF07653.7.ls  Variant SH3 domain                         28.7      2e-05   1
PF00625.11.fs Guanylate kinase                           20.9    3.2e-05   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00595.14.fs   1/3      54   138 ..     1    86 []    78.8  1.7e-21
PF00595.14.ls   1/3      54   138 ..     1    86 []    80.8    4e-21
PF00595.14.ls   2/3     330   403 ..     1    86 []    66.6  7.2e-17
PF00595.14.fs   2/3     330   403 ..     1    86 []    64.7  1.5e-17
PF00595.14.ls   3/3     532   610 ..     1    86 []    64.4  3.4e-16
PF00595.14.fs   3/3     532   610 ..     1    86 []    62.4  6.8e-17
PF07653.7.fs    1/1     629   688 ..     1    69 []    26.9  4.3e-07
PF07653.7.ls    1/1     629   688 ..     1    69 []    28.7    2e-05
PF00625.11.fs   1/1     799   856 ..    49   107 .]    20.9  3.2e-05

Alignments of top-scoring domains:
PF00595.14.fs: domain 1 of 3, from 54 to 138: score 78.8, E = 1.7e-21
                   *->evtlekedkrgglGfsikggsdkga....dkgifvsevlpGsgaAea
                      +vtl+k+ +  g+G+ ++gg d+++ ++++++i++s+vlpG g+A+ 
     ej01034    54    TVTLQKD-SKRGFGIAVSGGRDNPHfengETSIVISDVLPG-GPADG 98   

                   gGrLqaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                      Lq++D+++ vNG+++e++ h +av++l++sg+ + +++v+   
     ej01034    99 L--LQENDRVVMVNGTPMEDVLHSFAVQQLRKSGK-VAAIVVK    138  

PF00595.14.ls: domain 1 of 3, from 54 to 138: score 80.8, E = 4e-21
                   *->evtlekedkrgglGfsikggsdkga....dkgifvsevlpGsgaAea
                      +vtl+k+ +  g+G+ ++gg d+++ ++++++i++s+vlpG g+A+ 
     ej01034    54    TVTLQKD-SKRGFGIAVSGGRDNPHfengETSIVISDVLPG-GPADG 98   

                   gGrLqaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                      Lq++D+++ vNG+++e++ h +av++l++sg+ + +++v+   
     ej01034    99 L--LQENDRVVMVNGTPMEDVLHSFAVQQLRKSGK-VAAIVVK    138  

PF00595.14.ls: domain 2 of 3, from 330 to 403: score 66.6, E = 7.2e-17
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      ++++++   ++  G+++ +         ifv+e+ +  g A ++G L
     ej01034   330    LLMKSR--ANEEYGLRLGS--------QIFVKEMTRT-GLATKDGNL 365  

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                   ++GD+Il++NG+ +en+s+ +a +++ +s+g +++L+vl   
     ej01034   366 HEGDIILKINGTVTENMSLTDARKLIEKSRG-KLQLVVL    403  

PF00595.14.fs: domain 2 of 3, from 330 to 403: score 64.7, E = 1.5e-17
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      ++++++   ++  G+++ +         ifv+e+ +  g A ++G L
     ej01034   330    LLMKSR--ANEEYGLRLGS--------QIFVKEMTRT-GLATKDGNL 365  

                   qaGDqIlsvNGqdlenlsheeavlalkgsggsevtLtvl<-*
                   ++GD+Il++NG+ +en+s+ +a +++ +s+g +++L+vl   
     ej01034   366 HEGDIILKINGTVTENMSLTDARKLIEKSRG-KLQLVVL    403  

PF00595.14.ls: domain 3 of 3, from 532 to 610: score 64.4, E = 3.4e-16
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +++ +k  k+ ++G++++gg+d     gifv+ +++G  +Ae+ G L
     ej01034   532    KMVRFK--KGDSVGLRLAGGNDV----GIFVAGIQEG-TSAEQEG-L 570  

                   qaGDqIlsvNGqdlenlsheeavlalkgsgg.sevtLtvl<-*
                   q+GDqIl+vN qd+++l  e+avl l ++++++ vt++ +   
     ej01034   571 QEGDQILKVNTQDFRGLVREDAVLYLLEIPKgEMVTILAQ    610  

PF00595.14.fs: domain 3 of 3, from 532 to 610: score 62.4, E = 6.8e-17
                   *->evtlekedkrgglGfsikggsdkgadkgifvsevlpGsgaAeagGrL
                      +++ +k  k+ ++G++++gg+d     gifv+ +++G  +Ae+ G L
     ej01034   532    KMVRFK--KGDSVGLRLAGGNDV----GIFVAGIQEG-TSAEQEG-L 570  

                   qaGDqIlsvNGqdlenlsheeavlalkgsgg.sevtLtvl<-*
                   q+GDqIl+vN qd+++l  e+avl l ++++++ vt++ +   
     ej01034   571 QEGDQILKVNTQDFRGLVREDAVLYLLEIPKgEMVTILAQ    610  

PF07653.7.fs: domain 1 of 1, from 629 to 688: score 26.9, E = 4.3e-07
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskddd..gw
                      ++r +++++  + ++       L++++G+v++V     ++ +d++ +
     ej01034   629    FIRSHFECEK-ETPQS------LAFTRGEVFRVV----DTLYDgkLG 664  

                   .wegeslgg.GrrrRGlvPssaveel<-*
                   +w++ ++g++ ++  Gl+P+++++e+   
     ej01034   665 nWLAVRIGNeLEK--GLIPNKSRAEQ    688  

PF07653.7.ls: domain 1 of 1, from 629 to 688: score 28.7, E = 2e-05
                   *->ygraiedyvaAtdknenleeeeLslkkGdvvkVidvggskddd..gw
                      ++r +++++  + ++       L++++G+v++V     ++ +d++ +
     ej01034   629    FIRSHFECEK-ETPQS------LAFTRGEVFRVV----DTLYDgkLG 664  

                   .wegeslgg.GrrrRGlvPssaveel<-*
                   +w++ ++g++ ++  Gl+P+++++e+   
     ej01034   665 nWLAVRIGNeLEK--GLIPNKSRAEQ    688  

PF00625.11.fs: domain 1 of 1, from 799 to 856: score 20.9, E = 3.2e-05
                   *->aVrqvaksGkiciLDvepQGvkqlrtaelsNPvsvFIaPpSlqelek
                      +Vrq+++++k+++LDv p +v  l  ++   P+++F  P S q++++
     ej01034   799    TVRQIIEQDKHALLDVTPKAVDLLNYTQWF-PIVIFFNPDSRQGVKT 844  

                   rLrgrnketEEs<-*
                     + +n  ++ s   
     ej01034   845 MRQRLNPTSNKS    856  

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