hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-06394115/chunk_1/iprscan-20090618-06394115.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: ej01176
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00185                                                 272.5    3.2e-77   8

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00185    1/8     117   159 ..     1    38 []    29.7  0.00039
SM00185    2/8     161   201 ..     1    38 []    51.8    9e-11
SM00185    3/8     202   244 ..     1    38 []    25.6   0.0068
SM00185    4/8     247   286 ..     1    38 []    18.6     0.91
SM00185    5/8     288   328 ..     1    38 []    34.4  1.6e-05
SM00185    6/8     330   370 ..     1    38 []    43.6  2.6e-08
SM00185    7/8     372   412 ..     1    38 []    35.2  8.9e-06
SM00185    8/8     415   455 ..     1    38 []    33.7  2.5e-05

Alignments of top-scoring domains:
SM00185: domain 1 of 8, from 117 to 159: score 29.7, E = 0.00039
                   *->ndenkqavvdaG.glpaLvqLL....deevqkeAawaLsNlas<-*
                      +++++ +v++  ++++++v+ L+++++  +q+eAawaL+N+as   
     ej01176   117    PSPPIDEVINTPrVVDRFVEFLkrneNCTLQFEAAWALTNIAS    159  

SM00185: domain 2 of 8, from 161 to 201: score 51.8, E = 9e-11
                   *->ndenkqavvdaGglpaLvqLL...deevqkeAawaLsNlas<-*
                      +++++++v++aG++p++++LL+++ e+vq++A+waL+N+a    
     ej01176   161    TSQQTKIVIEAGAVPIFIELLnsdFEDVQEQAVWALGNIAG    201  

SM00185: domain 3 of 8, from 202 to 244: score 25.6, E = 0.0068
                   *->nde.nkqavvdaGglpaLvqLL....deevqkeAawaLsNlas<-*
                      ++   + +v ++ +l +L+ LL++++     ++A+waLsNl++   
     ej01176   202    DSSvCRDYVLNCSILNPLLTLLtkstRLTMTRNAVWALSNLCR    244  

SM00185: domain 4 of 8, from 247 to 286: score 18.6, E = 0.91
                   *->ndenkqavvdaGglpaLvqLL...deevqkeAawaLsNlas<-*
                      n+++  a v   +lp L +LL ++d +++  A+waLs+l++   
     ej01176   247    NPPPEFAKVSP-CLPVLSRLLfssDSDLLADACWALSYLSD    286  

SM00185: domain 5 of 8, from 288 to 328: score 34.4, E = 1.6e-05
                   *->ndenkqavvdaGglpaLvqLL...deevqkeAawaLsNlas<-*
                      ++e +qav+d+G+  +Lv+LL ++d +v   A++a++N++    
     ej01176   288    PNEKIQAVIDSGVCRRLVELLmhnDYKVASPALRAVGNIVT    328  

SM00185: domain 6 of 8, from 330 to 370: score 43.6, E = 2.6e-08
                   *->ndenkqavvdaGglpaLvqLL...deevqkeAawaLsNlas<-*
                      +d ++q++ ++ +lp+L++LL++++e+++keA+w++sN+++   
     ej01176   330    DDIQTQVILNCSALPCLLHLLsspKESIRKEACWTISNITA    370  

SM00185: domain 7 of 8, from 372 to 412: score 35.2, E = 8.9e-06
                   *->ndenkqavvdaGglpaLvqLL...deevqkeAawaLsNlas<-*
                      n  ++qav+da++ p L++ L++   + +keAawa++N +s   
     ej01176   372    NRAQIQAVIDANIFPVLIEILqkaEFRTRKEAAWAITNATS    412  

SM00185: domain 8 of 8, from 415 to 455: score 33.7, E = 2.5e-05
                   *->ndenkqavvdaGglpaLvqLL...deevqkeAawaLsNlas<-*
                      ++e++ ++v +G++++L++LL+  d +++++A+  L N+ +   
     ej01176   415    TPEQIRYLVSLGCIKPLCDLLtvmDSKIVQVALNGLENILR    455  

//