# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oek00030.fasta.nr -Q ek00030.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ek00030, 822 aa vs /cdna2/lib/nr/nr library 3071326396 residues in 8985982 sequences statistics sampled from 60000 to 8971901 sequences Expectation_n fit: rho(ln(x))= 5.7434+/-0.000188; mu= 11.3328+/- 0.011 mean_var=91.3117+/-18.288, 0's: 37 Z-trim: 114 B-trim: 3 in 1/63 Lambda= 0.134218 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(8985982) gi|148670554|gb|EDL02501.1| valosin containing pro ( 822) 5426 1061.2 0 gi|6094447|sp|P55072.4|TERA_HUMAN RecName: Full=Tr ( 806) 5315 1039.7 0 gi|55217|emb|CAA78412.1| murine valosin-containing ( 806) 5314 1039.5 0 gi|40889614|pdb|1R7R|A Chain A, The Crystal Struct ( 816) 5314 1039.5 0 gi|1174637|sp|P46462.3|TERA_RAT RecName: Full=Tran ( 806) 5311 1038.9 0 gi|74139564|dbj|BAE40919.1| unnamed protein produc ( 806) 5310 1038.7 0 gi|74192715|dbj|BAE34876.1| unnamed protein produc ( 806) 5309 1038.5 0 gi|73971210|ref|XP_852626.1| PREDICTED: similar to ( 806) 5308 1038.4 0 gi|74198702|dbj|BAE39824.1| unnamed protein produc ( 806) 5306 1038.0 0 gi|111305821|gb|AAI21795.1| Valosin-containing pro ( 806) 5306 1038.0 0 gi|189065396|dbj|BAG35235.1| unnamed protein produ ( 806) 5306 1038.0 0 gi|122140828|sp|Q3ZBT1.1|TERA_BOVIN RecName: Full= ( 806) 5304 1037.6 0 gi|1174636|sp|P03974.5|TERA_PIG RecName: Full=Tran ( 806) 5304 1037.6 0 gi|26390141|dbj|BAC25849.1| unnamed protein produc ( 806) 5303 1037.4 0 gi|26326751|dbj|BAC27119.1| unnamed protein produc ( 806) 5302 1037.2 0 gi|73971232|ref|XP_866203.1| PREDICTED: similar to ( 810) 5290 1034.9 0 gi|126334782|ref|XP_001368198.1| PREDICTED: simila ( 806) 5289 1034.7 0 gi|148670553|gb|EDL02500.1| valosin containing pro ( 814) 5289 1034.7 0 gi|73971228|ref|XP_538712.2| PREDICTED: similar to ( 812) 5286 1034.1 0 gi|53126280|emb|CAG30944.1| hypothetical protein [ ( 806) 5275 1032.0 0 gi|94408011|ref|XP_990665.1| PREDICTED: similar to ( 801) 5255 1028.1 0 gi|194225438|ref|XP_001498145.2| PREDICTED: simila ( 822) 5243 1025.8 0 gi|49257794|gb|AAH74716.1| Valosin-containing prot ( 805) 5198 1017.1 0 gi|29791670|gb|AAH50488.1| Valosin containing prot ( 806) 5187 1014.9 0 gi|149609398|ref|XP_001520419.1| PREDICTED: hypoth ( 805) 5186 1014.7 0 gi|34740143|dbj|BAC87740.1| CDC48 [Danio rerio] ( 806) 5165 1010.7 0 gi|28422362|gb|AAH46949.1| Vcp-prov protein [Xenop ( 805) 5163 1010.3 0 gi|1174638|sp|P23787.2|TERA_XENLA RecName: Full=Tr ( 805) 5155 1008.7 0 gi|213054513|gb|ACJ39432.1| cdc48 [Larimichthys cr ( 806) 5102 998.5 0 gi|146448775|gb|ABQ41382.1| cell division cycle 48 ( 806) 5101 998.3 0 gi|73971226|ref|XP_866167.1| PREDICTED: similar to ( 776) 5047 987.8 0 gi|73971212|ref|XP_866054.1| PREDICTED: similar to ( 761) 5028 984.1 0 gi|51949893|gb|AAU14869.1| valosin containing prot ( 748) 4798 939.6 0 gi|26350783|dbj|BAC39028.1| unnamed protein produc ( 723) 4786 937.2 0 gi|60735077|dbj|BAD91024.1| valosin containing pro ( 808) 4726 925.7 0 gi|73971230|ref|XP_866191.1| PREDICTED: similar to ( 819) 4716 923.7 0 gi|89130628|gb|AAI14307.1| Zgc:136908 [Danio rerio ( 805) 4699 920.4 0 gi|219470243|ref|XP_002232650.1| hypothetical prot ( 803) 4692 919.1 0 gi|156215254|gb|EDO36218.1| predicted protein [Nem ( 807) 4653 911.5 0 gi|91086235|ref|XP_966692.1| PREDICTED: similar to ( 803) 4643 909.6 0 gi|73971214|ref|XP_866075.1| PREDICTED: similar to ( 759) 4614 903.9 0 gi|152205934|dbj|BAF73714.1| valosin containing pr ( 808) 4611 903.4 0 gi|157015594|gb|EAA44058.3| AGAP005630-PA [Anophel ( 804) 4596 900.5 0 gi|108873203|gb|EAT37428.1| spermatogenesis associ ( 803) 4587 898.7 0 gi|167879951|gb|EDS43334.1| spermatogenesis associ ( 797) 4570 895.4 0 gi|83423461|dbj|BAE54254.1| transitional endoplasm ( 805) 4558 893.1 0 gi|212508909|gb|EEB12455.1| conserved hypothetical ( 804) 4541 889.8 0 gi|193617621|ref|XP_001949588.1| PREDICTED: simila ( 804) 4540 889.6 0 gi|66534286|ref|XP_392892.2| PREDICTED: similar to ( 800) 4538 889.3 0 gi|156548829|ref|XP_001605497.1| PREDICTED: simila ( 833) 4520 885.8 0 >>gi|148670554|gb|EDL02501.1| valosin containing protein (822 aa) initn: 5426 init1: 5426 opt: 5426 Z-score: 5676.1 bits: 1061.2 E(): 0 Smith-Waterman score: 5426; 99.878% identity (100.000% similar) in 822 aa overlap (1-822:1-822) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 PLPSGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 50 60 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 70 80 90 100 110 120 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 130 140 150 160 170 180 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 190 200 210 220 230 240 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 250 260 270 280 290 300 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 310 320 330 340 350 360 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 370 380 390 400 410 420 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 430 440 450 460 470 480 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 490 500 510 520 530 540 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 550 560 570 580 590 600 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 610 620 630 640 650 660 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 670 680 690 700 710 720 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|148 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 730 740 750 760 770 780 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|148 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 790 800 810 820 >>gi|6094447|sp|P55072.4|TERA_HUMAN RecName: Full=Transi (806 aa) initn: 5315 init1: 5315 opt: 5315 Z-score: 5560.0 bits: 1039.7 E(): 0 Smith-Waterman score: 5315; 100.000% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|609 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|609 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|609 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 >>gi|55217|emb|CAA78412.1| murine valosin-containing pro (806 aa) initn: 5314 init1: 5314 opt: 5314 Z-score: 5559.0 bits: 1039.5 E(): 0 Smith-Waterman score: 5314; 99.876% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|552 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|552 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|552 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|552 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 >>gi|40889614|pdb|1R7R|A Chain A, The Crystal Structure (816 aa) initn: 5314 init1: 5314 opt: 5314 Z-score: 5558.9 bits: 1039.5 E(): 0 Smith-Waterman score: 5314; 99.876% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|408 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::.:::::::::::::::::: gi|408 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDVGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|408 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|408 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYGAALEHHHHHH 770 780 790 800 810 >>gi|1174637|sp|P46462.3|TERA_RAT RecName: Full=Transiti (806 aa) initn: 5311 init1: 5311 opt: 5311 Z-score: 5555.8 bits: 1038.9 E(): 0 Smith-Waterman score: 5311; 99.876% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|117 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|117 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::.:::::::::::: gi|117 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGNVYTEDNDDDLYG 770 780 790 800 >>gi|74139564|dbj|BAE40919.1| unnamed protein product [M (806 aa) initn: 5310 init1: 5310 opt: 5310 Z-score: 5554.8 bits: 1038.7 E(): 0 Smith-Waterman score: 5310; 99.876% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|741 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL ::::::::::::::::::::::::::::::::::.::::::::::::::::::::::::: gi|741 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDTEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|741 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 >>gi|74192715|dbj|BAE34876.1| unnamed protein product [M (806 aa) initn: 5309 init1: 5309 opt: 5309 Z-score: 5553.8 bits: 1038.5 E(): 0 Smith-Waterman score: 5309; 99.876% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|741 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::.:::::::::::::::::::: gi|741 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATSRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|741 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 >>gi|73971210|ref|XP_852626.1| PREDICTED: similar to val (806 aa) initn: 5308 init1: 5308 opt: 5308 Z-score: 5552.7 bits: 1038.4 E(): 0 Smith-Waterman score: 5308; 99.876% identity (100.000% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|739 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|739 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVHLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|739 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 >>gi|74198702|dbj|BAE39824.1| unnamed protein product [M (806 aa) initn: 5306 init1: 5306 opt: 5306 Z-score: 5550.6 bits: 1038.0 E(): 0 Smith-Waterman score: 5306; 99.876% identity (99.876% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|741 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::::::::::::::::::::::::::::::::: ::::::::::::::::::::::::: gi|741 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLYEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|741 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|741 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 >>gi|111305821|gb|AAI21795.1| Valosin-containing protein (806 aa) initn: 5306 init1: 5306 opt: 5306 Z-score: 5550.6 bits: 1038.0 E(): 0 Smith-Waterman score: 5306; 99.876% identity (99.876% similar) in 806 aa overlap (17-822:1-806) 10 20 30 40 50 60 ek0003 PLPAGRHSRRPGEARAMASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP :::::::::::::::::::::::::::::::::::::::::::: gi|111 MASGADSKGDDLSTAILKQKNRPNRLIVDEAINEDNSVVSLSQP 10 20 30 40 70 80 90 100 110 120 ek0003 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 KMDELQLFRGDTVLLKGKKRREAVCIVLSDDTCSDEKIRMNRVVRNNLRVRLGDVISIQP 50 60 70 80 90 100 130 140 150 160 170 180 ek0003 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 CPDVKYGKRIHVLPIDDTVEGITGNLFEVYLKPYFLEAYRPIRKGDIFLVRGGMRAVEFK 110 120 130 140 150 160 190 200 210 220 230 240 ek0003 VVETDPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL :::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 VVETHPSPYCIVAPDTVIHCEGEPIKREDEEESLNEVGYDDIGGCRKQLAQIKEMVELPL 170 180 190 200 210 220 250 260 270 280 290 300 ek0003 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 RHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESES 230 240 250 260 270 280 310 320 330 340 350 360 ek0003 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 NLRKAFEEAEKNAPAIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVIVM 290 300 310 320 330 340 370 380 390 400 410 420 ek0003 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 AATNRPNSIDPALRRFGRFDREVDIGIPDATGRLEILQIHTKNMKLADDVDLEQVANETH 350 360 370 380 390 400 430 440 450 460 470 480 ek0003 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 GHVGADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLAVTMDDFRWALSQSNPSAL 410 420 430 440 450 460 490 500 510 520 530 540 ek0003 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 RETVVEVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGK 470 480 490 500 510 520 550 560 570 580 590 600 ek0003 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 TLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAK 530 540 550 560 570 580 610 620 630 640 650 660 ek0003 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 ARGGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIY 590 600 610 620 630 640 670 680 690 700 710 720 ek0003 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 IPLPDEKSRVAILKANLRKSPVAKDVDLEFLAKMTNGFSGADLTEICQRACKLAIRESIE 650 660 670 680 690 700 730 740 750 760 770 780 ek0003 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|111 SEIRRERERQTNPSAMEVEEDDPVPEIRRDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQ 710 720 730 740 750 760 790 800 810 820 ek0003 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG :::::::::::::::::::::::::::::::::::::::::: gi|111 SRGFGSFRFPSGNQGGAGPSQGSGGGTGGSVYTEDNDDDLYG 770 780 790 800 822 residues in 1 query sequences 3071326396 residues in 8985982 library sequences Tcomplib [34.26] (8 proc) start: Thu Jun 18 06:42:52 2009 done: Thu Jun 18 06:45:26 2009 Total Scan time: 1321.090 Total Display time: 0.420 Function used was FASTA [version 34.26.5 April 26, 2007]