hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-06584920/chunk_1/iprscan-20090618-06584920.nocrc
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Query sequence: ek00041
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00271                                                 117.7    1.3e-30   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00271    1/1      10    67 ..     1    72 []   117.7  1.3e-30

Alignments of top-scoring domains:
SM00271: domain 1 of 1, from 10 to 67: score 117.7, E = 1.3e-30
                   *->tdyYeiLGvskdAsddeIKKAYRkLAlkyHPDKnpgdpelseeklpe
                      +dyY iLG++k+Asd++IKKAYRk+Alk+HPDKn+            
     ek00041    10    KDYYCILGIEKGASDEDIKKAYRKQALKFHPDKNK------------ 44   

                   eekeeAeekFkeIneAYevLsDpek<-*
                     +++AeekFke++eAYevLsDp+k   
     ek00041    45 --SPQAEEKFKEVAEAYEVLSDPKK    67   

//