hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/TIGRFAMs_HMM.LIB.bin Sequence file: /db/iprscan/tmp/20080808/iprscan-20080808-23095321/chunk_1/iprscan-20080808-23095321.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: ek00083 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- TIGR02478 6PF1K_euk: 6-phosphofructokinase 1892.1 0 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- TIGR02478 1/1 36 777 .. 1 777 [] 1892.1 0 Alignments of top-scoring domains: TIGR02478: domain 1 of 1, from 36 to 777: score 1892.1, E = 0 *->krIgVLTSGGDAqGMNAAVRAVVRmaIyvGCrVYaIrEGYeGLVdGG k+IgVLTSGGDAqGMNAAVRAVVRm+IyvG++VY+I+EGY+G+VdGG ek00083 36 KAIGVLTSGGDAQGMNAAVRAVVRMGIYVGAKVYFIYEGYQGMVDGG 82 DnIeelsWeDVrGiLslGGTlIGTARCkeFRERpGRLkAArNLikrGIDa +nI e+ We+V++iL++GGT+IG+ARC++FR+R+GRLkAA+NL++rGI++ ek00083 83 SNIAEADWESVSSILQVGGTIIGSARCQAFRTREGRLKAACNLLQRGITN 132 LvVIGGDGSLTGADlFReEWpsLleELvdtgkItaEqakehrhLtIVGLV L+VIGGDGSLTGA+lFR EW++LleEL+ +g+I++E+++++++L++VG+V ek00083 133 LCVIGGDGSLTGANLFRKEWSGLLEELARNGQIDKEAVQKYAYLNVVGMV 182 GSIDNDmcgTDmTIGAdSALHRIcEAiDaIssTAqSHQRaFVVEVMGRHC GSIDND+cgTDmTIG+dSALHRI+E++DaI++TAqSHQR+FV+EVMGRHC ek00083 183 GSIDNDFCGTDMTIGTDSALHRIIEVVDAIMTTAQSHQRTFVLEVMGRHC 232 GyLALmAAiATGADYvFIPErPPeegdWedqLCakLkrnRkaGkRknIVI GyLAL++A+A+GAD+vF+PE+PPeeg We+q+C+kL++nR+++kR+nI+I ek00083 233 GYLALVSALACGADWVFLPESPPEEG-WEEQMCVKLSENRARKKRLNIII 281 VAEGAiDrelnpITsedVKdvLverLglDTRITvLGHVQRGGaPsAyDRi VAEGAiD++++pITse++K+++v++Lg+DTR+T+LGHVQRGG+PsA+DRi ek00083 282 VAEGAIDTQNKPITSEKIKELVVTQLGYDTRVTILGHVQRGGTPSAFDRI 331 LAtlqGvEAVlAvLesTPeteGAVVTGQKtPSpVIslrgNkIvRkPLvea LA+++GvEAV A+Le+TP+t P++V+sl+gN++vR+PL+e+ ek00083 332 LASRMGVEAVIALLEATPDT----------PACVVSLNGNHAVRLPLMEC 371 VrqTktVakaikerrFdeAvrLRgreFvenlatflelskpdqdkklvpsk V++T+ V+ka++errF +AvrLRgr+F+ nl+t+++l+++++d+++ +++ ek00083 372 VQMTQDVQKAMDERRFQDAVRLRGRSFAGNLNTYKRLAIKLPDDQIPKTN 421 adrlnlRvAIiHvGAPAgGMNaAtRaaVRyalarGHtviAIhNGFsGLar + +vA+i+vGAPA+GMNaA+R+aVR+++a+GH+++AI++GF+G+a+ ek00083 422 C-----NVAVINVGAPAAGMNAAVRSAVRVGIADGHRMLAIYDGFDGFAK 466 gdDDtPiCSvrELtWsDVeGWvgeGGSelGTnReLPngkDlgeiAykfqk g+ ++E++W DV+GW+g+GGS+lGT+R LP gk+l+eiA++ ++ ek00083 467 GQ-------IKEIGWTDVGGWTGQGGSILGTKRVLP-GKYLEEIATQMRT 508 hkiDGLlIIGGFEAFeallqLeqaRekYPaFrIPMVvIPATISNNVPGTE h i++LlIIGGFEA+ +ll+L++aRek+++F++PMV++PAT+SNNVPG++ ek00083 509 HSINALLIIGGFEAYLGLLELSAAREKHEEFCVPMVMVPATVSNNVPGSD 558 ySLGsDTALNeiteyCDkIKQSAsaskrRvFVvETmGGySGYLATmaGLa +S+G+DTALN+it++CD+IKQSAs++krRvF++ETmGGy+GYLA+m+GLa ek00083 559 FSIGADTALNTITDTCDRIKQSASGTKRRVFIIETMGGYCGYLANMGGLA 608 tGAdAaYipEegIslkdLqeDiehLkekfaegagkNragkLiLRNEnASk +GAdAaYi+Ee+++++dLq+++ehL+ek++++ ++++L+LRNE++S+ ek00083 609 AGADAAYIFEEPFDIRDLQSNVEHLTEKMKTT----IQRGLVLRNESCSE 654 nYTTdfIariisEEakGrFdaRtaVLGHmQQGGsPSPfDRvrAtRlAirA nYTTdfI++++sEE+kG+Fd+R++VLGHmQQGG+PSPfDR+++t++++rA ek00083 655 NYTTDFIYQLYSEEGKGVFDCRKNVLGHMQQGGAPSPFDRNFGTKISARA 704 vdfIeekikanksadklaaddtkeltdsavViGirgSnvlFtpVkGqlla +++I++k+k+ + +k + d ds++V+Gi+++nv F+pV+ +l+ ek00083 705 MEWITAKLKEARGRGKKFTTD-----DSICVLGISKRNVIFQPVA--ELK 747 keTdfehRrPKeqWWldLrpLvriLagrks<-* k TdfehR+PKeqWWl+LrpL++iLa++k+ ek00083 748 KQTDFEHRIPKEQWWLKLRPLMKILAKYKA 777 //