hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090416/iprscan-20090416-13244424/chunk_1/iprscan-20090416-13244424.nocrc
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Query sequence: ek00105
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00110                                                 133.1      3e-35   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00110    1/1     693   829 .]     1   146 []   133.1    3e-35

Alignments of top-scoring domains:
SM00110: domain 1 of 1, from 693 to 829: score 133.1, E = 3e-35
                   *->eykakprsAFsvilsyterpPpEmNpgqpirFdkvLyNqqghYdpsT
                        +++ r+AFs+ ++ ++  P+    +qpi+Fd +L N ++ +d + 
     ek00105   693    PLPQQMRVAFSAART-SNLAPG--TLDQPIVFDLLLNNLGETFDLQL 736  

                   GkFtCpvPGvYyFsYhievkgrRqnvkvsLmkngiqvlrvvstydeyqkg
                   G+F+Cpv G Y+F +h  + +   ++ v+Lmkn + vl  vs+y+++   
     ek00105   737 GRFNCPVNGTYVFIFHMLKLAVNVPLYVNLMKN-EEVL--VSAYANDGAP 783  

                   lydvaSGgalLqLeqGDqVWLelddeeknglyageevdSvFSGFLLfpd<
                   + + aS+ a+LqL qGDq WL+l +   + +y++++++S+FSG+LL+ d 
     ek00105   784 DHETASNHAILQLFQGDQIWLRLHR---GAIYGSSWKYSTFSGYLLYQD  829  

                   -*
                     
     ek00105     -    -    

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