hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-23275067/chunk_1/iprscan-20080808-23275067.nocrc
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Query sequence: ek00108
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00361                                                 113.9    1.8e-29   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00361    1/1     123   202 ..     1    91 []   113.9  1.8e-29

Alignments of top-scoring domains:
SM00361: domain 1 of 1, from 123 to 202: score 113.9, E = 1.8e-29
                   *->lvlvnglvspeeakdEdferelseeeeyfgevgkinKivinkvtkrl
                      lv+v+gl s+++a++E+++r++     yfg++gki+K+vin++t+  
     ek00108   123    LVFVVGL-SQRLADPEVLKRPE-----YFGKFGKIHKVVINNSTS-- 161  

                   NayenhkrgsggvYitFFersEDAarAivdlnGryfdGRtlkae<-*
                     y++++++s+++Y+t+ +rsEDA rAi+++n++++dGRtlka+   
     ek00108   162 --YAGSQGPSASAYVTY-IRSEDALRAIQCVNNVVVDGRTLKAS    202  

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