hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-07041872/chunk_1/iprscan-20090618-07041872.nocrc
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Query sequence: ek00114
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 207.2    1.5e-57   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/7      40    80 ..     1    46 []    19.9     0.34
SM00320    2/7      87   131 ..     1    46 []    26.0    0.005
SM00320    3/7     134   172 ..     1    46 []    26.2   0.0046
SM00320    4/7     173   212 ..     1    46 []    47.5  1.8e-09
SM00320    5/7     213   251 ..     1    46 []    28.3    0.001
SM00320    6/7     253   292 ..     1    46 []    36.9  2.6e-06
SM00320    7/7     293   331 ..     1    46 []    22.3    0.069

Alignments of top-scoring domains:
SM00320: domain 1 of 7, from 40 to 80: score 19.9, E = 0.34
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                        +l ++l+gH+   +V+++  +        p  ++s s+D+t rlW
     ek00114    40    RyRLSCSLRGHEL--DVRGLVCCAYP-----PGAFVSVSrDRTTRLW 79   

                   d<-*
                       
     ek00114    80 A    80   

SM00320: domain 2 of 7, from 87 to 131: score 26.0, E = 0.005
                   *->t.kllrtlkgHtgespVtsvafspdggss.dspnllasgs.Dgtirl
                      + +  + ++gH++   V++v++ p++  + ++  l+a+g++D++i++
     ek00114    87    SfTEMHCMSGHSN--FVSCVCIIPSS--DiYPHGLIATGGnDHNICI 129  

                   Wd<-*
                   ++   
     ek00114   130 FS    131  

SM00320: domain 3 of 7, from 134 to 172: score 26.2, E = 0.0046
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++ +l++lkgH++   V+s++    g        l+sgs+D t ++W
     ek00114   134    SpMPLYILKGHKN--TVCSLSSGKFG-------TLLSGSwDTTAKVW 171  

                   d<-*
                       
     ek00114   172 L    172  

SM00320: domain 4 of 7, from 173 to 212: score 47.5, E = 1.8e-09
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++k+ +tl+gHt+  +V++v++ p         l+++gs D+t++lW
     ek00114   173    NdKCMMTLQGHTA--AVWAVKILPEQ------GLMLTGSaDKTVKLW 211  

                   d<-*
                   +   
     ek00114   212 K    212  

SM00320: domain 5 of 7, from 213 to 251: score 28.3, E = 0.001
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                       +++ rt++gH++   V+++a+ +        + ++s+ +D +ir W
     ek00114   213    AgRCERTFSGHED--CVRGLAILSE-------TEFLSCAnDASIRRW 250  

                   d<-*
                       
     ek00114   251 Q    251  

SM00320: domain 6 of 7, from 253 to 292: score 36.9, E = 2.6e-06
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t+++l ++ gHt+  +++s+++ p+       + +++  +D+++r+W
     ek00114   253    TgECLEVYYGHTN--YIYSISVFPNC------RDFVTTAeDRSLRIW 291  

                   d<-*
                   +   
     ek00114   292 K    292  

SM00320: domain 7 of 7, from 293 to 331: score 22.3, E = 0.069
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgsDgtirlWd
                       +++ +t++   +  +++++++ ++g      ++++ +sDg ir++ 
     ek00114   293    HgECAQTIRLPAQ--SIWCCCVLDNG------DIVVGASDGIIRVFT 331  

                   <-*
                      
     ek00114     -     -    

//