hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080808/iprscan-20080808-23535747/chunk_1/iprscan-20080808-23535747.nocrc
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Query sequence: ek00129
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00524                                                 426.5   1.4e-123   1
SM00523                                                 232.3    4.1e-65   1

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00523     1/1      37   146 ..     1   124 []   232.3  4.1e-65
SM00524     1/1     327   536 ..     1   212 []   426.5 1.4e-123

Alignments of top-scoring domains:
SM00523: domain 1 of 1, from 37 to 146: score 232.3, E = 4.1e-65
                   *->eeekwakkavesLvKkLKkkNkqqLeeLlqAVeSkgkpptrCvtipr
                      e e +ak+a+esLvKkLK+k k++L++L++A++++g++p++Cvti+ 
     ek00129    37    ESETFAKRAIESLVKKLKEK-KDELDSLITAITTNGAHPSKCVTIQ- 81   

                   eRslDgRlqvsdplQadrkglPhVlycRLfRWPDLqsddkhELKalptCq
                    R+lDgRlqv+     +rkg+PhV+y+RL+RWPDL+   k+ELK++++Cq
     ek00129    82 -RTLDGRLQVA-----GRKGFPHVIYARLWRWPDLH---KNELKHVKYCQ 122  

                   yafesksnpegevCcNPYHYsrverpe<-*
                   yaf++k++    vC+NPYHY+rv++p+   
     ek00129   123 YAFDLKCD---SVCVNPYHYERVVSPG    146  

SM00524: domain 1 of 1, from 327 to 536: score 426.5, E = 1.4e-123
                   *->esWcsIaYyElntRVGetfkvsspdphtvtVDGftdpssdgsrfcLG
                      e+WcsIaY+E++++VGetfkv+s++p +vtVDG++dp s+g+rfcLG
     ek00129   327    EYWCSIAYFEMDVQVGETFKVPSSCP-IVTVDGYVDP-SGGDRFCLG 371  

                   qlsNvnRneaiekiRkhIGkGvqLsyendqGdVwiynrsdspIFVqSptl
                   qlsNv+R+eaie++R hIGkGvqL+++++ GdVw++++sd+++FVqS++l
     ek00129   372 QLSNVHRTEAIERARLHIGKGVQLECKGE-GDVWVRCLSDHAVFVQSYYL 420  

                   depsgrplsdtVhKlpPgysqKalKvFDmrkfaqqmrdaalsaqaAaaaq
                   d+++gr+++d+VhK++P ++   +KvFD+r+++ qm+++a++aqaAaaaq
     ek00129   421 DREAGRAPGDAVHKIYPSAY---IKVFDLRQCHRQMQQQAATAQAAAAAQ 467  

                   aAavaGmap....yigekllerelakgaegvydlrrmCtiRiSFVKGWGe
                   aAavaG++p++++++g++   + +a++ +gv+dlrr+C++R+SFVKGWG+
     ek00129   468 AAAVAGNIPgpgsVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKGWGP 517  

                   dYsRqditstPCWiEvhLn<-*
                   dY+Rq+i++tPCWiE+hL+   
     ek00129   518 DYPRQSIKETPCWIEIHLH    536  

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