hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-00002504/chunk_1/iprscan-20080809-00002504.nocrc
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Query sequence: ek00160
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00079.10.fs Serpin (serine protease inhibitor)             583.1     1e-175   1
PF00079.10.ls Serpin (serine protease inhibitor)             585.1   6.3e-173   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00079.10.fs   1/1      68   445 .]     1   397 []   583.1   1e-175
PF00079.10.ls   1/1      68   445 .]     1   397 []   585.1 6.3e-173

Alignments of top-scoring domains:
PF00079.10.fs: domain 1 of 1, from 68 to 445: score 583.1, E = 1e-175
                   *->ldsralkLasantdFAfsLYkqLveskspdkNiffSPvSIssALAml
                      +++ ++ +a+ ++dF++++++q+++ +s d+N++fSP++++s+LAml
     ek00160    68    HHPPSY-VAHLASDFGVRVFQQVAQ-ASKDRNVVFSPYGVASVLAML 112  

                   sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqelnrpd
                   +L ++g+T++Qi++++gF+ ++++          ++++++hL +el+ p+
     ek00160   113 QLTTGGETQQQIQAAMGFKIDDKG----------MAPALRHLYKELMGPW 152  

                   kelqlttgnaLFvdkslkLldeFledvkklYqaevfsvDFsdapeeAkkq
                   ++++++t +a+Fv+ +lkL++ F+ ++ +l+++ v +vDFs+ +e+A+ +
     ek00160   153 NKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSE-VERARFI 201  

                   INdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenTr
                   INdwV+ +T+G+I +Ll +g++D+ T+lvLVN++yF G+Wk+pF+ + T+
     ek00160   202 INDWVKTHTKGMISNLLGKGAVDQLTRLVLVNALYFNGQWKTPFPDSSTH 251  

                   eedFhvdkkttVkVPMMksqlgtfryTeyfrdeeLsckVleLpYkgnata
                    ++Fh+++++tV+VPMM +q+++f+yTe+++++   +++leLpY+g++++
     ek00160   252 RRLFHKSDGSTVSVPMM-AQTNKFNYTEFTTPDGHYYDILELPYHGDTLS 300  

                   mfiLlP.pdegkLeqvEaaLtpetlrkWtlknmtkrsveLyLPKFsIegt
                   mfi +P ++e +L+++ ++L++ ++++W + nmt+ ++ L+LPKFs+e+ 
     ek00160   301 MFIAAPyEKEVPLSALTNILSAQLISHW-KGNMTRLPRLLVLPKFSLETE 349  

                   ydLksvLakLGItdlFseskADLsgisededLkVSkavHKAvLevdEeGt
                    dL+++L++LG+td+F   +AD++ +s++e+L+V +a++K+++ev+E+Gt
     ek00160   350 VDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQALQKVKIEVNESGT 399  

                   EAaAATaaeivprsslppelevefkfdRPFLFlIrenpTgsiLFmGkVvn
                    A+++Ta+++++r++++     e+ +dRPFLF++r+npTg++LFmG+V++
     ek00160   400 VASSSTAVIVSARMAPE-----EIIMDRPFLFVVRHNPTGTVLFMGQVME 444  

                   P<-*
                   P   
     ek00160   445 P    445  

PF00079.10.ls: domain 1 of 1, from 68 to 445: score 585.1, E = 6.3e-173
                   *->ldsralkLasantdFAfsLYkqLveskspdkNiffSPvSIssALAml
                      +++ ++ +a+ ++dF++++++q+++ +s d+N++fSP++++s+LAml
     ek00160    68    HHPPSY-VAHLASDFGVRVFQQVAQ-ASKDRNVVFSPYGVASVLAML 112  

                   sLGAkgnTrtQilegLgFnltetseaeyadhklaihqgFqhLlqelnrpd
                   +L ++g+T++Qi++++gF+ ++++          ++++++hL +el+ p+
     ek00160   113 QLTTGGETQQQIQAAMGFKIDDKG----------MAPALRHLYKELMGPW 152  

                   kelqlttgnaLFvdkslkLldeFledvkklYqaevfsvDFsdapeeAkkq
                   ++++++t +a+Fv+ +lkL++ F+ ++ +l+++ v +vDFs+ +e+A+ +
     ek00160   153 NKDEISTTDAIFVQRDLKLVQGFMPHFFRLFRSTVKQVDFSE-VERARFI 201  

                   INdwVekqTqGKIkdLlsdgsLDsdTvlvLVNyIyFKGkWkkpFdpenTr
                   INdwV+ +T+G+I +Ll +g++D+ T+lvLVN++yF G+Wk+pF+ + T+
     ek00160   202 INDWVKTHTKGMISNLLGKGAVDQLTRLVLVNALYFNGQWKTPFPDSSTH 251  

                   eedFhvdkkttVkVPMMksqlgtfryTeyfrdeeLsckVleLpYkgnata
                    ++Fh+++++tV+VPMM +q+++f+yTe+++++   +++leLpY+g++++
     ek00160   252 RRLFHKSDGSTVSVPMM-AQTNKFNYTEFTTPDGHYYDILELPYHGDTLS 300  

                   mfiLlP.pdegkLeqvEaaLtpetlrkWtlknmtkrsveLyLPKFsIegt
                   mfi +P ++e +L+++ ++L++ ++++W + nmt+ ++ L+LPKFs+e+ 
     ek00160   301 MFIAAPyEKEVPLSALTNILSAQLISHW-KGNMTRLPRLLVLPKFSLETE 349  

                   ydLksvLakLGItdlFseskADLsgisededLkVSkavHKAvLevdEeGt
                    dL+++L++LG+td+F   +AD++ +s++e+L+V +a++K+++ev+E+Gt
     ek00160   350 VDLRKPLENLGMTDMFRQFQADFTSLSDQEPLHVAQALQKVKIEVNESGT 399  

                   EAaAATaaeivprsslppelevefkfdRPFLFlIrenpTgsiLFmGkVvn
                    A+++Ta+++++r++++     e+ +dRPFLF++r+npTg++LFmG+V++
     ek00160   400 VASSSTAVIVSARMAPE-----EIIMDRPFLFVVRHNPTGTVLFMGQVME 444  

                   P<-*
                   P   
     ek00160   445 P    445  

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