hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-00002504/chunk_1/iprscan-20080809-00002504.nocrc
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Query sequence: ek00160
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00093                                                 567.8   4.1e-166   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00093    1/1      83   445 .]     1   372 []   567.8 4.1e-166

Alignments of top-scoring domains:
SM00093: domain 1 of 1, from 83 to 445: score 567.8, E = 4.1e-166
                   *->fdLykqLakesp.kNiffSPvSIssALamlsLGAkGsTatQilevLg
                      +++++q+a++s+++N++fSP++++s+Laml+L ++G+T++Qi++++g
     ek00160    83    VRVFQQVAQASKdRNVVFSPYGVASVLAMLQLTTGGETQQQIQAAMG 129  

                   FnlteltseasddiHqgFqhLlselnkpdpneqleLktaNaLFvdkslkl
                   F     ++++   +  +++hL++el+ p+ n+ +e++t +a+Fv+++lkl
     ek00160   130 FKI---DDKG---MAPALRHLYKELMGPW-NK-DEISTTDAIFVQRDLKL 171  

                   leeFledvkklYgaEvqsvdFsdpaeeAkkqINdwVekqTqGKIkdLlse
                   ++ F+  + +l+ + v++vdFs+  e+A+  INdwV+++T+G+I +Ll  
     ek00160   172 VQGFMPHFFRLFRSTVKQVDFSEV-ERARFIINDWVKTHTKGMISNLLGK 220  

                   gsld.dTrlvLVNaIyFKGkWkkpFdpenTreedFhvdetttVkVpMMsq
                   g++d++TrlvLVNa+yF G+Wk+pF+ ++T+ + Fh+++++tV+VpMM q
     ek00160   221 GAVDqLTRLVLVNALYFNGQWKTPFPDSSTHRRLFHKSDGSTVSVPMMAQ 270  

                   tgmkfnyghdeels...cqvleLPYkGdnaSmliiLPdeveDsggLeqlE
                   t+ kfny+++ +++++ +++leLPY+Gd++Sm+i  P e+e  ++L++l 
     ek00160   271 TN-KFNYTEFTTPDghyYDILELPYHGDTLSMFIAAPYEKE--VPLSALT 317  

                   kaLtpetlkkWtklsltkrksveLyLPKFkleiSgsydLkddvLekLGit
                   + L+++++++W+  ++t+  ++ L+LPKF+le+  + dL++ +Le+LG+t
     ek00160   318 NILSAQLISHWKG-NMTRL-PRLLVLPKFSLET--EVDLRK-PLENLGMT 362  

                   dlFspskADLSgisedasedLkvSkvvHKAflEVnEeGtEAaAaTgviav
                   d+F + +AD++ +s++  e+L+v ++++K+++EVnE Gt A+++T+vi++
     ek00160   363 DMFRQFQADFTSLSDQ--EPLHVAQALQKVKIEVNESGTVASSSTAVIVS 410  

                   pr.....fkanrPFLFlIrdnkTgsiLFmGkVvnP<-*
                   +r  +++++++rPFLF++r+n+Tg++LFmG+V+ P   
     ek00160   411 ARmapeeIIMDRPFLFVVRHNPTGTVLFMGQVMEP    445  

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