# /hgtech/tools/solaris8/bin/fasta34_t -T 8 -b50 -d10 -E0.01 -H -Oek00172.fasta.nr -Q ek00172.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 ek00172, 705 aa vs /cdna2/lib/nr/nr library 2355815254 residues in 6825066 sequences statistics sampled from 60000 to 6817887 sequences Expectation_n fit: rho(ln(x))= 5.7795+/-0.000196; mu= 10.6943+/- 0.011 mean_var=104.0002+/-19.642, 0's: 38 Z-trim: 67 B-trim: 30 in 1/66 Lambda= 0.125764 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 38, opt: 26, open/ext: -10/-2, width: 16 The best scores are: opt bits E(6825066) gi|553204|gb|AAA35601.1| binding protein ( 695) 4603 846.1 0 gi|114641269|ref|XP_001155464.1| PREDICTED: amyloi ( 693) 4553 837.0 0 gi|67971300|dbj|BAE01992.1| unnamed protein produc ( 695) 4535 833.8 0 gi|73954467|ref|XP_856822.1| PREDICTED: similar to ( 695) 4381 805.8 0 gi|119588173|gb|EAW67769.1| amyloid beta (A4) prec ( 642) 4294 790.0 0 gi|457740|emb|CAA81583.1| putative protein [Mus mu ( 695) 4280 787.5 0 gi|37589175|gb|AAH52396.2| Amyloid beta (A4) precu ( 695) 4266 785.0 0 gi|149027854|gb|EDL83314.1| amyloid beta (A4) prec ( 697) 4266 785.0 0 gi|1351955|sp|Q06335|APLP2_MOUSE Amyloid-like prot ( 695) 4263 784.4 0 gi|73954435|ref|XP_856156.1| PREDICTED: similar to ( 699) 4073 749.9 5.9e-214 gi|114641267|ref|XP_001155332.1| PREDICTED: amyloi ( 705) 3694 681.2 3e-193 gi|73954459|ref|XP_856660.1| PREDICTED: similar to ( 707) 3532 651.8 2.1e-184 gi|349470|gb|AAA36130.1| binding protein ( 669) 3529 651.2 3e-184 gi|73954445|ref|XP_856368.1| PREDICTED: similar to ( 682) 3529 651.2 3e-184 gi|73954455|ref|XP_856576.1| PREDICTED: similar to ( 711) 3489 644.0 4.7e-182 gi|148693392|gb|EDL25339.1| amyloid beta (A4) prec ( 729) 3477 641.8 2.2e-181 gi|30354705|gb|AAH51999.1| Aplp2 protein [Mus musc ( 707) 3447 636.4 9.3e-180 gi|119588174|gb|EAW67770.1| amyloid beta (A4) prec ( 654) 3435 634.2 4e-179 gi|109484434|ref|XP_001055967.1| PREDICTED: simila ( 709) 3433 633.8 5.4e-179 gi|114641277|ref|XP_001154536.1| PREDICTED: amyloi ( 699) 3409 629.5 1.1e-177 gi|73954433|ref|XP_856117.1| PREDICTED: similar to ( 704) 3280 606.1 1.2e-170 gi|515629|gb|AAA20039.1| DNA-binding protein [Mus ( 511) 3111 575.3 1.6e-161 gi|73954431|ref|XP_856077.1| PREDICTED: similar to ( 699) 3058 565.8 1.6e-158 gi|109484440|ref|XP_001055911.1| PREDICTED: simila ( 704) 2934 543.3 9.7e-152 gi|114641273|ref|XP_001155048.1| PREDICTED: amyloi ( 698) 2882 533.8 6.7e-149 gi|73954423|ref|XP_855915.1| PREDICTED: similar to ( 700) 2713 503.2 1.1e-139 gi|49256317|gb|AAH74398.1| Aplp2 B protein [Xenopu ( 669) 2686 498.3 3.3e-138 gi|114641291|ref|XP_001153384.1| PREDICTED: amyloi ( 487) 2561 475.5 1.7e-131 gi|119588175|gb|EAW67771.1| amyloid beta (A4) prec ( 469) 2511 466.4 9.2e-129 gi|349468|gb|AAA36032.1| binding protein ( 523) 2511 466.4 9.9e-129 gi|114641287|ref|XP_001154005.1| PREDICTED: amyloi ( 522) 2510 466.2 1.1e-128 gi|193785582|dbj|BAG54641.1| unnamed protein produ ( 656) 2511 466.5 1.2e-128 gi|119588176|gb|EAW67772.1| amyloid beta (A4) prec ( 698) 2511 466.5 1.2e-128 gi|12653211|gb|AAH00373.1| APLP2 protein [Homo sap ( 751) 2511 466.6 1.3e-128 gi|114641295|ref|XP_001154139.1| PREDICTED: amyloi ( 696) 2510 466.3 1.4e-128 gi|114641261|ref|XP_001154885.1| PREDICTED: amyloi ( 716) 2510 466.4 1.4e-128 gi|114641275|ref|XP_001155104.1| PREDICTED: amyloi ( 727) 2510 466.4 1.4e-128 gi|114641263|ref|XP_001154363.1| PREDICTED: amyloi ( 734) 2510 466.4 1.4e-128 gi|13325116|gb|AAH04371.1| APLP2 protein [Homo sap ( 522) 2508 465.9 1.4e-128 gi|114641255|ref|XP_001155204.1| PREDICTED: amyloi ( 749) 2510 466.4 1.5e-128 gi|114641293|ref|XP_001154299.1| PREDICTED: amyloi ( 759) 2510 466.4 1.5e-128 gi|114641265|ref|XP_001154477.1| PREDICTED: amyloi ( 768) 2510 466.4 1.5e-128 gi|114641251|ref|XP_001154423.1| PREDICTED: amyloi ( 774) 2510 466.4 1.5e-128 gi|73954465|ref|XP_856781.1| PREDICTED: similar to ( 732) 2508 466.0 1.8e-128 gi|90084659|dbj|BAE91171.1| unnamed protein produc ( 437) 2504 465.1 2.1e-128 gi|73954453|ref|XP_856537.1| PREDICTED: similar to ( 522) 2483 461.3 3.3e-127 gi|73954425|ref|XP_855958.1| PREDICTED: similar to ( 751) 2480 460.9 6.4e-127 gi|73954469|ref|XP_856859.1| PREDICTED: similar to ( 755) 2480 460.9 6.4e-127 gi|73954463|ref|XP_856735.1| PREDICTED: similar to ( 770) 2480 460.9 6.5e-127 gi|109484442|ref|XP_001055858.1| PREDICTED: simila ( 771) 2455 456.4 1.5e-125 >>gi|553204|gb|AAA35601.1| binding protein (695 aa) initn: 4603 init1: 4603 opt: 4603 Z-score: 4516.0 bits: 846.1 E(): 0 Smith-Waterman score: 4603; 100.000% identity (100.000% similar) in 695 aa overlap (11-705:1-695) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP :::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 MAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE 240 250 260 270 280 290 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD 300 310 320 330 340 350 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 360 370 380 390 400 410 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 420 430 440 450 460 470 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV 480 490 500 510 520 530 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET 540 550 560 570 580 590 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|553 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK 600 610 620 630 640 650 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|553 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 660 670 680 690 >>gi|114641269|ref|XP_001155464.1| PREDICTED: amyloid be (693 aa) initn: 3109 init1: 3109 opt: 4553 Z-score: 4467.0 bits: 837.0 E(): 0 Smith-Waterman score: 4553; 99.137% identity (99.424% similar) in 695 aa overlap (11-705:1-693) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP :::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 MAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV ::::::::::::::::::::::::::::::::::::::: ::::::::::::::::: :: gi|114 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCLFFHKERMEVCENHQHWHMVV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE :::::::::::::::::::::::::::::::::::::::::::::::::.::::::: : gi|114 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEEEEEEEEE--E 180 190 200 210 220 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE 230 240 250 260 270 280 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD 290 300 310 320 330 340 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 350 360 370 380 390 400 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 410 420 430 440 450 460 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV ::::::::::::::::::::::::::.::::::::::::::::::::::::::::::::: gi|114 SQVMTHLHVIEERRNQSLSLLYKVPYIAQEIQEEIDELLQEQRADMDQFTASISETPVDV 470 480 490 500 510 520 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET 530 540 550 560 570 580 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|114 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK 590 600 610 620 630 640 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|114 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 650 660 670 680 690 >>gi|67971300|dbj|BAE01992.1| unnamed protein product [M (695 aa) initn: 4535 init1: 4535 opt: 4535 Z-score: 4449.4 bits: 833.8 E(): 0 Smith-Waterman score: 4535; 98.273% identity (99.568% similar) in 695 aa overlap (11-705:1-695) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP ::::::::::::::::::::::::::: :::::::::::.:::::::::: gi|679 MAATGTAAAAATGRLLLLLLVGLTAPASALAGYIEALAASAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 QIAMFCGQLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV .::::::::::::::. ::::::::::::::::::::::::::::::::::::::::::: gi|679 TIDNWCRRDKKQCKSHTVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE :::::::::::::::::::::::::::::::::::::::::::::::::.:::::::::: gi|679 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEEEEEEEEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE ::::.::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 EDYDIYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE 240 250 260 270 280 290 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :.::: ::::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|679 PNSDGPMSDKEISHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD 300 310 320 330 340 350 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 360 370 380 390 400 410 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 420 430 440 450 460 470 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV :::::::::::::::::::::::::::::::::::::::::::::.:::::::::::::: gi|679 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADVDQFTASISETPVDV 480 490 500 510 520 530 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET 540 550 560 570 580 590 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|679 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK 600 610 620 630 640 650 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|679 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 660 670 680 690 >>gi|73954467|ref|XP_856822.1| PREDICTED: similar to amy (695 aa) initn: 4381 init1: 4381 opt: 4381 Z-score: 4298.3 bits: 805.8 E(): 0 Smith-Waterman score: 4381; 94.388% identity (98.273% similar) in 695 aa overlap (11-705:1-695) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP ::: :::::.:::.::.:::.:::::: :::::::::::::::::::::: gi|739 MAAPGTAAASATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV :::.::::::::::::::::::::::::.:: :::::::::::::::::::::::::. : gi|739 QIAVFCGKLNMHVNIQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV :.::::::::::::.. :.:::::::::::::::::::::: :::.:::::::::::::: gi|739 SVDNWCRRDKKQCKTHVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE :::::.:::::: ::::::::::.::::::::::::: . :. ..::::::.:::::::: gi|739 KEACLAQGMTLYRYGMLLPCGVDRFHGTEYVCCPQTKTVESTVSKEEEEDEDEEEEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE ::::.:::::::::::::::::::::::::::::::::::::::::::::::::.::::: gi|739 EDYDIYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNDENPTE 240 250 260 270 280 290 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :.::::.:.::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 PSSDGTISEKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD 300 310 320 330 340 350 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 360 370 380 390 400 410 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 420 430 440 450 460 470 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV 480 490 500 510 520 530 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::.::::::::::::.::::::::.:::::::::::::::::::::::::::::: gi|739 RVSSEESDEIPPFHPFHPFPSLPENEGSGAGEQDGGLIGAEEKVINSKNKVDENMVIDET 540 550 560 570 580 590 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK ::::::::::::::::: : :::::::::::::::::::::::::::::::::::::::: gi|739 LDVKEMIFNAERVGGLEAEPESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK 600 610 620 630 640 650 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|739 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 660 670 680 690 >>gi|119588173|gb|EAW67769.1| amyloid beta (A4) precurso (642 aa) initn: 4294 init1: 4294 opt: 4294 Z-score: 4213.5 bits: 790.0 E(): 0 Smith-Waterman score: 4294; 100.000% identity (100.000% similar) in 642 aa overlap (64-705:1-642) 40 50 60 70 80 90 ek0017 TAPALALAGYIEALAANAGTGFAVAEPQIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFET :::::::::::::::::::::::::::::: gi|119 MFCGKLNMHVNIQTGKWEPDPTGTKSCFET 10 20 30 100 110 120 130 140 150 ek0017 KEEVLQYCQEMYPELQITNVMEANQRVSIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVL :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KEEVLQYCQEMYPELQITNVMEANQRVSIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVL 40 50 60 70 80 90 160 170 180 190 200 210 ek0017 LVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LVPEKCQFFHKERMEVCENHQHWHTVVKEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCC 100 110 120 130 140 150 220 230 240 250 260 270 ek0017 PQTKIIGSVSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 PQTKIIGSVSKEEEEEDEEEEEEEDEEEDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEE 160 170 180 190 200 210 280 290 300 310 320 330 ek0017 GEEVVEDRDYYYDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GEEVVEDRDYYYDTFKGDDYNEENPTEPGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFE 220 230 240 250 260 270 340 350 360 370 380 390 ek0017 TSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVK :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 TSADDNEHARFQKAKEQLEIRHRNRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVK 280 290 300 310 320 330 400 410 420 430 440 450 ek0017 ALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ALEKEAASEKQQLVETHLARVEAMLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRA 340 350 360 370 380 390 460 470 480 490 500 510 ek0017 ENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 ENKDRLHTIRHYQHVLAVDPEKAAQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQE 400 410 420 430 440 450 520 530 540 550 560 570 ek0017 EIDELLQEQRADMDQFTASISETPVDVRVSSEESEEIPPFHPFHPFPALPENEGSGVGEQ :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 EIDELLQEQRADMDQFTASISETPVDVRVSSEESEEIPPFHPFHPFPALPENEGSGVGEQ 460 470 480 490 500 510 580 590 600 610 620 630 ek0017 DGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLS :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 DGGLIGAEEKVINSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLS 520 530 540 550 560 570 640 650 660 670 680 690 ek0017 SSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYE :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 SSALIGLLVIAVAIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYE 580 590 600 610 620 630 700 ek0017 NPTYKYLEQMQI :::::::::::: gi|119 NPTYKYLEQMQI 640 >>gi|457740|emb|CAA81583.1| putative protein [Mus muscul (695 aa) initn: 4280 init1: 4280 opt: 4280 Z-score: 4199.3 bits: 787.5 E(): 0 Smith-Waterman score: 4280; 92.230% identity (97.986% similar) in 695 aa overlap (11-705:1-695) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP :::::::::::::.::.:::.:::::: :::::::::::::::::::::: gi|457 MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV ::::::::::::::::::::::::::::::. :::::::::::.:::::::::::::: : gi|457 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV .::.::::::.::::..: :::::::::::::::::..:::::.:::::::.::.:::.: gi|457 NIDSWCRRDKRQCKSHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE ::::::.:.:::::::::::::::::::::::::::: . : : .::.::::.::::: gi|457 KEACLTEGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKTVDSDSTMSKEEEEEEEDEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE ::::. :::::::::::::::::.::..:::::::::::::::::: ::::::::::::: gi|457 EDYDLDKSEFPTEADLEDFTEAAADEEEEDEEEGEEVVEDRDYYYDPFKGDDYNEENPTE 240 250 260 270 280 290 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :.:.::.:::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|457 PSSEGTISDKEIVHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD 300 310 320 330 340 350 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|457 RVKKEWEEAELQAKNLPKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 360 370 380 390 400 410 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|457 RRRIALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 420 430 440 450 460 470 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV ::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::: gi|457 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTSSISENPVDV 480 490 500 510 520 530 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::::::::::.::::.: ::::::..:::::::::::::::::::.::::::::: gi|457 RVSSEESEEIPPFHPLHPFPSLSENEGSGMAEQDGGLIGAEEKVINSKNKMDENMVIDET 540 550 560 570 580 590 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK ::::::::::::::::::: ::::::::::::::.::::::::::::::::::::::::: gi|457 LDVKEMIFNAERVGGLEEEPESVGPLREDFSLSSNALIGLLVIAVAIATVIVISLVMLRK 600 610 620 630 640 650 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|457 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 660 670 680 690 >>gi|37589175|gb|AAH52396.2| Amyloid beta (A4) precursor (695 aa) initn: 4266 init1: 4266 opt: 4266 Z-score: 4185.6 bits: 785.0 E(): 0 Smith-Waterman score: 4266; 92.086% identity (97.842% similar) in 695 aa overlap (11-705:1-695) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP :::::::::::::.::.:::.:::::: :::::::::::::::::::::: gi|375 MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV ::::::::::::::::::::::::::::::. :::::::::::.:::::::::::::: : gi|375 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV .::.::::::.::::..: :::::::::::::::::..:::::.:::::::.::.:::.: gi|375 NIDSWCRRDKRQCKSHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE ::::::.:.:::::::::::::::::::::::::::: . : : .::.::::.::::: gi|375 KEACLTEGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKTVDSDSTMSKEEEEEEEDEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE ::::. :::::::::::::::::.::..:::::::::::::::::: ::::::::::::: gi|375 EDYDLDKSEFPTEADLEDFTEAAADEEEEDEEEGEEVVEDRDYYYDPFKGDDYNEENPTE 240 250 260 270 280 290 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :.:.::.:::::.::::::::::::::::::::::::::::::::::::::::::::::: gi|375 PSSEGTISDKEIVHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD 300 310 320 330 340 350 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|375 RVKKEWEEAELQAKNLPKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 360 370 380 390 400 410 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|375 RRRIALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 420 430 440 450 460 470 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV ::::::::::::::::::::::::::::::::::::::::::::::::::.::::.:::: gi|375 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTSSISENPVDV 480 490 500 510 520 530 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::::::::::.::: .: ::::::..:::::::::::::::::::.::::::::: gi|375 RVSSEESEEIPPFHPLHPFLSLSENEGSGMAEQDGGLIGAEEKVINSKNKMDENMVIDET 540 550 560 570 580 590 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK ::::::::::::::::::: ::::::::::::::.::::::::::::::::::::::::: gi|375 LDVKEMIFNAERVGGLEEEPESVGPLREDFSLSSNALIGLLVIAVAIATVIVISLVMLRK 600 610 620 630 640 650 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|375 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 660 670 680 690 >>gi|149027854|gb|EDL83314.1| amyloid beta (A4) precurso (697 aa) initn: 2847 init1: 2847 opt: 4266 Z-score: 4185.6 bits: 785.0 E(): 0 Smith-Waterman score: 4266; 92.275% identity (97.282% similar) in 699 aa overlap (11-705:1-697) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP :::::::::::::.::.:::.:::::: :::::::::::::::::::::: gi|149 MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV ::::::::::::::::::::::::::::::. :::::::::::.:::::::::::::: : gi|149 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV .::.:::::::::.:..: ::::::::::::::::::.:::::.:::::::.::.::::: gi|149 NIDSWCRRDKKQCRSHIVIPFKCLVGEFVSDVLLVPENCQFFHQERMEVCEKHQRWHTVV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE ::::::.::::::::::::::::::::::::::::::.. : : .:: ::::::::: gi|149 KEACLTEGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKVVDSDSTMSKEE--EEEEEEDEE 180 190 200 210 220 250 260 270 280 290 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDD----EDEEEGEEVVEDRDYYYDTFKGDDYNEE ::: . :::::::::::::::::.:::. :.::::::::::::::::.::::::::: gi|149 EDYALDKSEFPTEADLEDFTEAAADEDEDEEEEEEEEGEEVVEDRDYYYDSFKGDDYNEE 230 240 250 260 270 280 300 310 320 330 340 350 ek0017 NPTEPGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHR :::::.::::.:::::.::::::::::::::::::::::::::::::::::::::::::: gi|149 NPTEPSSDGTISDKEIAHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHR 290 300 310 320 330 340 360 370 380 390 400 410 ek0017 NRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEA .::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 SRMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEA 350 360 370 380 390 400 420 430 440 450 460 470 ek0017 MLNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKA :::::::.:::::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MLNDRRRIALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKA 410 420 430 440 450 460 480 490 500 510 520 530 ek0017 AQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISET ::::::::::::::::::::::::::::::::::::::::::::::::::::::.::::. gi|149 AQMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTSSISEN 470 480 490 500 510 520 540 550 560 570 580 590 ek0017 PVDVRVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMV ::::::::::::::::::::::::.: ::::::..:::::::::::::::::::.::::: gi|149 PVDVRVSSEESEEIPPFHPFHPFPSLSENEGSGMAEQDGGLIGAEEKVINSKNKMDENMV 530 540 550 560 570 580 600 610 620 630 640 650 ek0017 IDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLV ::::::::::::::::::::::: .::::::::::::::::::::::::::::::::::: gi|149 IDETLDVKEMIFNAERVGGLEEEPDSVGPLREDFSLSSSALIGLLVIAVAIATVIVISLV 590 600 610 620 630 640 660 670 680 690 700 ek0017 MLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::::::: gi|149 MLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 650 660 670 680 690 >>gi|1351955|sp|Q06335|APLP2_MOUSE Amyloid-like protein (695 aa) initn: 4263 init1: 4263 opt: 4263 Z-score: 4182.6 bits: 784.4 E(): 0 Smith-Waterman score: 4263; 91.799% identity (97.986% similar) in 695 aa overlap (11-705:1-695) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP :::::::::::::.::.:::.:::::: :::::::::::::::::::::: gi|135 MAATGTAAAAATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV ::::.:::::::::::::::::::::::::. :::::::::::.:::::::::::::: : gi|135 QIAMLCGKLNMHVNIQTGKWEPDPTGTKSCLGTKEEVLQYCQEIYPELQITNVMEANQPV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV .::.::::::.::::..: :::::::::::::::::..:::::.:::::::.::.:::.: gi|135 NIDSWCRRDKRQCKSHIVIPFKCLVGEFVSDVLLVPDNCQFFHQERMEVCEKHQRWHTLV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE ::::::.:.:::::::::::::::::::::::::::: . : : .::.::::.::::: gi|135 KEACLTEGLTLYSYGMLLPCGVDQFHGTEYVCCPQTKTVDSDSTMSKEEEEEEEDEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE ::::. :::::::::::::::::.::..:::::::::::::::::: ::::::::::::: gi|135 EDYDLDKSEFPTEADLEDFTEAAADEEEEDEEEGEEVVEDRDYYYDPFKGDDYNEENPTE 240 250 260 270 280 290 310 320 330 340 350 360 ek0017 PGSDGTMSDKEITHDVKVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRNRMD :.:.::.:::::.::::::::::::::::::.:::::::::::::::::::::::::::: gi|135 PSSEGTISDKEIVHDVKVPPTPLPTNDVDVYLETSADDNEHARFQKAKEQLEIRHRNRMD 300 310 320 330 340 350 370 380 390 400 410 420 ek0017 RVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND ::::::::::::::::::.::::::::::::::::::::::::::::::::::::::::: gi|135 RVKKEWEEAELQAKNLPKTERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAMLND 360 370 380 390 400 410 430 440 450 460 470 480 ek0017 RRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK :::.:::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|135 RRRIALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAAQMK 420 430 440 450 460 470 490 500 510 520 530 540 ek0017 SQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETPVDV ::::::::::::::::::.:::::::::::::::::::::::::::::::.::::.:::: gi|135 SQVMTHLHVIEERRNQSLTLLYKVPYVAQEIQEEIDELLQEQRADMDQFTSSISENPVDV 480 490 500 510 520 530 550 560 570 580 590 600 ek0017 RVSSEESEEIPPFHPFHPFPALPENEGSGVGEQDGGLIGAEEKVINSKNKVDENMVIDET :::::::::::::::.::::.: ::::::..:::::::::::::::::::.::::::::: gi|135 RVSSEESEEIPPFHPLHPFPSLSENEGSGMAEQDGGLIGAEEKVINSKNKMDENMVIDET 540 550 560 570 580 590 610 620 630 640 650 660 ek0017 LDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAVAIATVIVISLVMLRK ::::::::::::::::::: ::::::::::::::.::::::::::::::::::::::::: gi|135 LDVKEMIFNAERVGGLEEEPESVGPLREDFSLSSNALIGLLVIAVAIATVIVISLVMLRK 600 610 620 630 640 650 670 680 690 700 ek0017 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI ::::::::::::::::::::::::::::::::::::::::::::: gi|135 RQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 660 670 680 690 >>gi|73954435|ref|XP_856156.1| PREDICTED: similar to amy (699 aa) initn: 3275 init1: 1663 opt: 4073 Z-score: 3996.3 bits: 749.9 E(): 5.9e-214 Smith-Waterman score: 4078; 88.451% identity (92.958% similar) in 710 aa overlap (11-705:1-699) 10 20 30 40 50 60 ek0017 EPRARATRRGMAATGTAAAAATGRLLLLLLVGLTAPALALAGYIEALAANAGTGFAVAEP ::: :::::.:::.::.:::.:::::: :::::::::::::::::::::: gi|739 MAAPGTAAASATGKLLVLLLLGLTAPAAALAGYIEALAANAGTGFAVAEP 10 20 30 40 50 70 80 90 100 110 120 ek0017 QIAMFCGKLNMHVNIQTGKWEPDPTGTKSCFETKEEVLQYCQEMYPELQITNVMEANQRV :::.::::::::::::::::::::::::.:: :::::::::::::::::::::::::. : gi|739 QIAVFCGKLNMHVNIQTGKWEPDPTGTKKCFGTKEEVLQYCQEMYPELQITNVMEANEPV 60 70 80 90 100 110 130 140 150 160 170 180 ek0017 SIDNWCRRDKKQCKSRFVTPFKCLVGEFVSDVLLVPEKCQFFHKERMEVCENHQHWHTVV :.::::::::::::.. :.:::::::::::::::::::::: :::.:::::::::::::: gi|739 SVDNWCRRDKKQCKTHVVVPFKCLVGEFVSDVLLVPEKCQFSHKEQMEVCENHQHWHTVV 120 130 140 150 160 170 190 200 210 220 230 240 ek0017 KEACLTQGMTLYSYGMLLPCGVDQFHGTEYVCCPQTKIIGSVSKEEEEEDEEEEEEEDEE :::::.:::::: ::::::::::.::::::::::::: . :. ..::::::.:::::::: gi|739 KEACLAQGMTLYRYGMLLPCGVDRFHGTEYVCCPQTKTVESTVSKEEEEDEDEEEEEDEE 180 190 200 210 220 230 250 260 270 280 290 300 ek0017 EDYDVYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVEDRDYYYDTFKGDDYNEENPTE ::::.::::::::::::::::::::::::::::::::::: : . gi|739 EDYDIYKSEFPTEADLEDFTEAAVDEDDEDEEEGEEVVED-----------PYVGAKRHS 240 250 260 270 310 320 330 340 350 ek0017 PG-SDGTMSDKEITHDV--KVPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRN :: . ...: .:..: .::::::::::::::::::::::::::::::::::::::: gi|739 PGFGTSSLSADVMTQQVVRAIPPTPLPTNDVDVYFETSADDNEHARFQKAKEQLEIRHRN 280 290 300 310 320 330 360 370 380 390 400 410 ek0017 RMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAM :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 RMDRVKKEWEEAELQAKNLPKAERQTLIQHFQAMVKALEKEAASEKQQLVETHLARVEAM 340 350 360 370 380 390 420 430 440 450 460 470 ek0017 LNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 LNDRRRMALENYLAALQSDPPRPHRILQALRRYVRAENKDRLHTIRHYQHVLAVDPEKAA 400 410 420 430 440 450 480 490 500 510 520 530 ek0017 QMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 QMKSQVMTHLHVIEERRNQSLSLLYKVPYVAQEIQEEIDELLQEQRADMDQFTASISETP 460 470 480 490 500 510 540 550 560 570 580 ek0017 VDVRVSSEESEEIPPFHPFHPFPALPENE------------GSGVGEQDGGLIGAEEKVI ::::::::::.::::::::::::.::::: :::.::::::::::::::: gi|739 VDVRVSSEESDEIPPFHPFHPFPSLPENEDTQRELYHPMKKGSGAGEQDGGLIGAEEKVI 520 530 540 550 560 570 590 600 610 620 630 640 ek0017 NSKNKVDENMVIDETLDVKEMIFNAERVGGLEEERESVGPLREDFSLSSSALIGLLVIAV :::::::::::::::::::::::::::::::: : ::::::::::::::::::::::::: gi|739 NSKNKVDENMVIDETLDVKEMIFNAERVGGLEAEPESVGPLREDFSLSSSALIGLLVIAV 580 590 600 610 620 630 650 660 670 680 690 700 ek0017 AIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|739 AIATVIVISLVMLRKRQYGTISHGIVEVDPMLTPEERHLNKMQNHGYENPTYKYLEQMQI 640 650 660 670 680 690 705 residues in 1 query sequences 2355815254 residues in 6825066 library sequences Tcomplib [34.26] (8 proc) start: Sat Aug 9 00:11:03 2008 done: Sat Aug 9 00:13:03 2008 Total Scan time: 966.380 Total Display time: 0.310 Function used was FASTA [version 34.26.5 April 26, 2007]