hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20090618/iprscan-20090618-07162620/chunk_1/iprscan-20090618-07162620.nocrc
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Query sequence: ek00224
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model      Description                                  Score    E-value  N 
--------   -----------                                  -----    ------- ---
SM00498                                                 609.5   1.2e-178   1

Parsed for domains:
Model      Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------   ------- ----- -----    ----- -----      -----  -------
SM00498      1/1     640  1083 ..     1   499 []   609.5 1.2e-178

Alignments of top-scoring domains:
SM00498: domain 1 of 1, from 640 to 1083: score 609.5, E = 1.2e-178
                   *->pkkepkpkkkLKqLhWdklnslrssrqApsNPseisegtvWettvnd
                      +kk++kp++ +K+++W+k++           P e se+++W      
     ek00224   640    QKKMYKPEVSMKRINWSKIE-----------PTELSENCFW-----L 670  

                   kldeekfLynnldldeleelFaakektkkakkrsvsekksklkkkkvqqn
                   +++e+kf +n +++++l+  Fa++ k +k+ + +++ekk++ +kkkv++ 
     ek00224   671 RVKEDKF-ENPDLFAKLALNFATQIKVQKNAE-ALEEKKTGPTKKKVKE- 717  

                   lkilDpkrsqnpplaIllrslhcklsfeetvikeailevDedvlsvdlle
                   l+ilDpk++qn  l+I+l+s+  ++++e+  i++ ilev+ed+ls+ l++
     ek00224   718 LRILDPKTAQN--LSIFLGSY--RMPYED--IRNVILEVNEDMLSEALIQ 761  

                   qLlkfaPYsktkeelkklreykeddekspeeLaraeqiFlllisnLipyl
                   +L k++P   ++  l++l e k +    +++L+++eq F +++s+ +++l
     ek00224   762 NLVKHLP---EQKILNELAELKNE----YDDLCEPEQ-FGVVMSS-VKML 802  

                   eeRlnallfkanFeeevedLkpklekveaAceeLreSkkFrklLeliLai
                   ++Rl+++lfk++Fee+++++kp++++v+ AceeL++S++F +lLel+L++
     ek00224   803 QPRLSSILFKLTFEEHINNIKPSIIAVTLACEELKKSESFNRLLELVLLV 852  

                   GNyMNagsrrrrGqAqGFkLssLlkLsdvKsadnktTLLHflvkiirkky
                   GNyMN+gsr+  +q+ GFk+ +L+k++d+Ksad+ktTLLHf+++i+++ky
     ek00224   853 GNYMNSGSRN--AQSLGFKINFLCKIRDTKSADQKTTLLHFIADICEEKY 900  

                   pdllkFysdlhhvdkaskvnleqlekdvkqlerqiknlEldkggLsdpeg
                   +d+lkF+++l hv+ askv+++ l++++ ++e+qi++lE+d+++++  e+
     ek00224   901 RDILKFPEELEHVESASKVSAQILKSNLASMEQQIVHLERDIKKFPQAEN 950  

                   hpddkflevmtpFlkaAkekyekLqkdlrdlktrfeklveyygedpkdrd
                   ++ dkf+e+mt+F k A+e+yekL++++ ++++++e+l ey+ +d+k+  
     ek00224   951 QH-DKFVEKMTSFTKTAREQYEKLSTMHNNMMKLYENLGEYFIFDSKT-- 997  

                   vspeeFFkdfneFlkeFkkaaeenlaiEskrkeeEeeerrakqlalrvke
                   vs+eeFF+d+n+F++ F++a+ en    +kr+e+Ee++r +++la   ke
     ek00224   998 VSIEEFFGDLNNFRTLFLEAVREN----NKRREMEEKTR-RAKLA---KE 1039 

                   tteyeqssskqkeneerrvernplmdfeverdflgvldsllkelrtdssf
                   ++e+e+++ +qk+       +++l+d ++e+d++gv+d+ll++l+++++f
     ek00224  1040 KAEQEKLE-RQKK-------KKQLIDINKEGDETGVMDNLLEALQSGAAF 1081 

                   er<-*
                   ++   
     ek00224  1082 RD    1083 

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