hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080809/iprscan-20080809-00253484/chunk_1/iprscan-20080809-00253484.nocrc
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Query sequence: ek00226
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00320                                                 149.3      4e-40   7

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00320    1/7      64   103 ..     1    46 []    31.7  9.9e-05
SM00320    2/7     106   148 ..     1    46 []    24.7    0.013
SM00320    3/7     154   194 ..     1    46 []    19.7     0.37
SM00320    4/7     208   244 ..     1    46 []    17.7     0.78
SM00320    5/7     262   305 ..     1    46 []    16.3      1.3
SM00320    6/7     730   771 ..     1    46 []    11.8      6.6
SM00320    7/7     774   813 ..     1    46 []    27.3   0.0022

Alignments of top-scoring domains:
SM00320: domain 1 of 7, from 64 to 103: score 31.7, E = 9.9e-05
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                        kl +tl+ H+g   V++++++++g      ++++sgs+D ++ + 
     ek00226    64    RlKLEATLNVHDG--CVNTICWNDTG------EYILSGSdDTKLVIS 102  

                   d<-*
                   +   
     ek00226   103 N    103  

SM00320: domain 2 of 7, from 106 to 148: score 24.7, E = 0.013
                   *->t.kllrtlk.gHtgespVtsvafspdggssdspnllasgs.Dgtirl
                      ++k+l t+++gH++   + s +f p      ++++++s+s+Dg i  
     ek00226   106    SrKVLTTIRsGHRA--NIFSAKFLPCT----NDKQIVSCSgDGVIFY 146  

                   Wd<-*
                    +   
     ek00226   147 TN    148  

SM00320: domain 3 of 7, from 154 to 194: score 19.7, E = 0.37
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      +++  + +++H g    + +   p++     p  ++s+++Dgt+r +
     ek00226   154    EtNRQCQFTCHYG--TTYEIMTVPND-----PYTFLSCGeDGTVRWF 193  

                   d<-*
                   d   
     ek00226   194 D    194  

SM00320: domain 4 of 7, from 208 to 244: score 17.7, E = 0.78
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      ++ l+   +      + tsva++p       p +la+g++D+++r++
     ek00226   208    DdILINCRR------AATSVAICPPI-----PYYLAVGCsDSSVRIY 243  

                   d<-*
                   d   
     ek00226   244 D    244  

SM00320: domain 5 of 7, from 262 to 305: score 16.3, E = 1.3
                   *->t.kllrtlkgHtge..spVtsvafspdggssdspnllasgs.Dgtir
                      t+ + r ++ H ++++++Vts+++s dg      ++l+s s+D  i+
     ek00226   262    TgMVARFIPSHLNNksCRVTSLCYSEDG-----QEILVSYSsDY-IY 302  

                   lWd<-*
                   l+d   
     ek00226   303 LFD    305  

SM00320: domain 6 of 7, from 730 to 771: score 11.8, E = 6.6
                   *->t.kllrtlkgHtge.spVtsvafspdggssdspnllasgs.Dgtirl
                       + + +++kgH+++++ +    f          n++ sgs+ g+i +
     ek00226   730    RpLVKMVYKGHRNSrTMIKEANFWGA-------NFVMSGSdCGHIFI 769  

                   Wd<-*
                   Wd   
     ek00226   770 WD    771  

SM00320: domain 7 of 7, from 774 to 813: score 27.3, E = 0.0022
                   *->t.kllrtlkgHtgespVtsvafspdggssdspnllasgs.DgtirlW
                      t + l+ l++ ++   V++++ +p +       +las++ D  i++W
     ek00226   774    TaEHLMLLEADNH--VVNCLQPHPFD------PILASSGiDYDIKIW 812  

                   d<-*
                   +   
     ek00226   813 S    813  

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